Gene Sare_4665 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_4665 
Symbol 
ID5704844 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp5285728 
End bp5286501 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content72% 
IMG OID641274063 
Productputative transmembrane anti-sigma factor 
Protein accessionYP_001539409 
Protein GI159040156 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.714924 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGGCGTG ACCACGACGA TGCCACCATC GGCGCGTACC TGGCTGGTGA ACTGCCGGAC 
AGGGCACGTG AGGCGTTCGA GGCGCATCTG CTCACCTGTG ATCGATGCTG GGCCGAGGTC
GCCGCCGGCC GCCGGGGTCG GGAACTGGTG CATCTGGCCC GGGATCCGGT ACCCCCGGAC
CTGGCCGCCC GGCTGGCCGG GGCCGTCGTC GCCGAGCAGC ACGTCGGGCC GCACCACGAC
TTCGCGGCGG AGGGACGGAT CCCGGCCCGG CTCCGCGGGC TGCGGCACCG ACGTACGGGC
GGTGCCCGGC GGTTCTGGGC GTTGGCCACC GCCGCGTTGG CCCTGGTCGC GGCCCTCGGC
GCGATGATCG TGGACAGGGA CACGGCTGCC GTACCGGCAC CGCAGATTGC CGTCGCGGTC
GCCGGCTACC ACGACGGCCG CCTGCCCGGC ACGACCATTC CCGCCCGGCC GGGACCTGAC
CTGTCCGCGC TGCGACTTTC CGGAGCCGGT GCCAGCGCCG GTGACCTGGC CGGACAGTCG
GTTTCCGGGT ACGCCTACCG GGACGACACC GGCCGGCGGT TGATCATTTA TGTCAGTGAC
GAGCCGTTCC CCGTGTCCAC GCAGGCCGAG AACGCCATCG GAAGCGCCGG CGCCGGGATG
ATGCGCCTCG ACGACGTCGT CGTCCTCTGT TCCCGCCGTC CGCATACCGC GCTGGTGCTC
GGCGACGACG AGGAGCTGGT TCGGCAGGCC GCCACCACCC TCGACCTGAT CTGA
 
Protein sequence
MRRDHDDATI GAYLAGELPD RAREAFEAHL LTCDRCWAEV AAGRRGRELV HLARDPVPPD 
LAARLAGAVV AEQHVGPHHD FAAEGRIPAR LRGLRHRRTG GARRFWALAT AALALVAALG
AMIVDRDTAA VPAPQIAVAV AGYHDGRLPG TTIPARPGPD LSALRLSGAG ASAGDLAGQS
VSGYAYRDDT GRRLIIYVSD EPFPVSTQAE NAIGSAGAGM MRLDDVVVLC SRRPHTALVL
GDDEELVRQA ATTLDLI