Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_4665 |
Symbol | |
ID | 5704844 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 5285728 |
End bp | 5286501 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641274063 |
Product | putative transmembrane anti-sigma factor |
Protein accession | YP_001539409 |
Protein GI | 159040156 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.714924 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAGGCGTG ACCACGACGA TGCCACCATC GGCGCGTACC TGGCTGGTGA ACTGCCGGAC AGGGCACGTG AGGCGTTCGA GGCGCATCTG CTCACCTGTG ATCGATGCTG GGCCGAGGTC GCCGCCGGCC GCCGGGGTCG GGAACTGGTG CATCTGGCCC GGGATCCGGT ACCCCCGGAC CTGGCCGCCC GGCTGGCCGG GGCCGTCGTC GCCGAGCAGC ACGTCGGGCC GCACCACGAC TTCGCGGCGG AGGGACGGAT CCCGGCCCGG CTCCGCGGGC TGCGGCACCG ACGTACGGGC GGTGCCCGGC GGTTCTGGGC GTTGGCCACC GCCGCGTTGG CCCTGGTCGC GGCCCTCGGC GCGATGATCG TGGACAGGGA CACGGCTGCC GTACCGGCAC CGCAGATTGC CGTCGCGGTC GCCGGCTACC ACGACGGCCG CCTGCCCGGC ACGACCATTC CCGCCCGGCC GGGACCTGAC CTGTCCGCGC TGCGACTTTC CGGAGCCGGT GCCAGCGCCG GTGACCTGGC CGGACAGTCG GTTTCCGGGT ACGCCTACCG GGACGACACC GGCCGGCGGT TGATCATTTA TGTCAGTGAC GAGCCGTTCC CCGTGTCCAC GCAGGCCGAG AACGCCATCG GAAGCGCCGG CGCCGGGATG ATGCGCCTCG ACGACGTCGT CGTCCTCTGT TCCCGCCGTC CGCATACCGC GCTGGTGCTC GGCGACGACG AGGAGCTGGT TCGGCAGGCC GCCACCACCC TCGACCTGAT CTGA
|
Protein sequence | MRRDHDDATI GAYLAGELPD RAREAFEAHL LTCDRCWAEV AAGRRGRELV HLARDPVPPD LAARLAGAVV AEQHVGPHHD FAAEGRIPAR LRGLRHRRTG GARRFWALAT AALALVAALG AMIVDRDTAA VPAPQIAVAV AGYHDGRLPG TTIPARPGPD LSALRLSGAG ASAGDLAGQS VSGYAYRDDT GRRLIIYVSD EPFPVSTQAE NAIGSAGAGM MRLDDVVVLC SRRPHTALVL GDDEELVRQA ATTLDLI
|
| |