| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_4650 |
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| Symbol | |
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| ID | 5705706 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | - |
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| Start bp | 5268851 |
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| End bp | 5270080 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641274050 |
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| Product | RNA polymerase ECF-subfamily sigma factor |
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| Protein accession | YP_001539397 |
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| Protein GI | 159040144 |
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| COG category | [K] Transcription |
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| COG ID | [COG4941] Predicted RNA polymerase sigma factor containing a TPR repeat domain |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.267181 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.578872 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGGCGGG TCAGCGAGGC GGTCGCCACC GCCTACGCCG AGCACTGGGG TCGCATTGTC
GCCCTGCTGA TCCGGCTTGC TGGGGACTGG GACCTGGCGG AGGAGTGCGC CCAGGACGCC
TTTGCCGAGG CGCTCACGCG CTGGCCGACG GAGGGGATAC CGAACCGCCC TGGGGGATGG
CTCACCACCA CGGCACGTAA TCGTGCGGTG GACCGGCTCC GTCGGTCCAC CGTGGAAGCC
AGAAAGCTGC GCGACGTGTC CCGGCTGGGG CAGCCGGCCC CGGTCGGCAA CTTTCCCGAC
GAACGCCTCG AGCTGATGTT CACCTGTGCG CACCCGGCGC TCACCAGCGA GGCGCAGGTC
GCGCTCATTC TGCGCTGTCT GGTCGGGCTC CGGACCGCGG AGATCGCTCG GGCGTTCCTG
GTGTCGGAAC ACACCATGGG GCAACGGCTG TTCCGCGCGA AGAACAAGAT CCGCCATGCC
GGAATCCCGT TTCGGGTGCC GCCGGCCCAG CTGCTGCCGG AGCGACTGTC GGCCGTACTC
GCGGTGCTCT ACCTGCTGTT CAACGAGGGC TACGCGGCGA CCGCCGGTAC GAACCTCGTC
AAGGCCAGCC TCTCCGGAGA GGCGATCCGG CTGGCCCGGC TCCTCACCAC CCTGATGCCG
GCTGAGCCCG AAGCGCGCGG ACTACTTGCG CTCATGCTGC TGCACGACGC CCGCCGTGCG
TCTCGCGTAG ATGAGCACGG TGACCTCGTC ACCCTCGCCG ACCAGGACCG TTCGGCCTGG
AACCACACCC AGATCGCCGA AGCGGTCGCA CTGCTGGAAC AGGCGCTGGC CCAGCGCCGC
CCCGGCGCCT ACCAGGTGCA GGCGGCGATC GCCGCGGTCC ACGCCGAGGC GTCCGAGGCG
GCGACGACGG ACTGGCCGCA GATCGTCGGC CTGTACGCGC AACTCATCCG CCTGGCACCC
AGCCCGGTCG TCGAGCTCAA CCGGGCGGTG GCCGTGGCGA TGACCGACGG GCCCGAAGCC
GGACTGGCGT TGGTGGATCG CCTGGCCGCC GCCGGTACGC TCAACGACTA CTACCTGCTG
CCGGCGACCC GGGCCGACCT GCTGCGCCGC CTGGGAAAGC ACTCCGAGGC GACGGTCGCC
TACCGCCGGG CACTCGATCT GTGCGCTACC GACGCCGAGC GCCGGTACCT GTGCCGGCGC
CTGCGCGAGG TGTCGGCACG CCTCTCGTAG
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| Protein sequence | MGRVSEAVAT AYAEHWGRIV ALLIRLAGDW DLAEECAQDA FAEALTRWPT EGIPNRPGGW
LTTTARNRAV DRLRRSTVEA RKLRDVSRLG QPAPVGNFPD ERLELMFTCA HPALTSEAQV
ALILRCLVGL RTAEIARAFL VSEHTMGQRL FRAKNKIRHA GIPFRVPPAQ LLPERLSAVL
AVLYLLFNEG YAATAGTNLV KASLSGEAIR LARLLTTLMP AEPEARGLLA LMLLHDARRA
SRVDEHGDLV TLADQDRSAW NHTQIAEAVA LLEQALAQRR PGAYQVQAAI AAVHAEASEA
ATTDWPQIVG LYAQLIRLAP SPVVELNRAV AVAMTDGPEA GLALVDRLAA AGTLNDYYLL
PATRADLLRR LGKHSEATVA YRRALDLCAT DAERRYLCRR LREVSARLS
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