| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_4634 |
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| Symbol | |
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| ID | 5707151 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | - |
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| Start bp | 5255108 |
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| End bp | 5256469 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641274036 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001539383 |
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| Protein GI | 159040130 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00985731 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGTCCAACT CGTTGACCTT CACCGACCTC GGTGTGCCCG ACACGCTCGA CCGCCTACTG
TCCGCAGCCG GGGTGGAACG CCCGTTCCCG ATCCAGGCCG CGACCCTGCC CGACGCACTC
GCCGGGCGGG ACGTGCTCGG CCGGGGCCGT ACCGGCTCGG GTAAGACCTA TGCCTTCGTG
CTGGCGGTAC TGACCCGACT GGCCGCCTCC GCGACGTCAC GGCGGGCCGG ACGCCCGCGG
GCGCTGATCC TCGTGCCAAC CCGGGAACTG GCAACTCAGA TCGACAGTGT GATGGCACCG
TTGGCGCGGG CGCTGTCCCT ACGCACGATG GTGGTCTTCG GTGGCGTCGC TGCCCGACCG
CAGATCACCG GGCTGCGCGC CGGAGTCGAT GTCCTGGTGG CCTGCCCGGG CCGGCTGGCC
GACCACGTTC AGGCCGGTAA CGCACACCTG GACGCCGTCG AGATCACCGT GCTCGACGAG
GCCGACCACA TGGCCGACCT CGGCTTCCTG CCCACCGTAC GGCGCCTGTT GGAACGGACC
CCGCACCGCG GTCAGCGTCT GTTGTTCTCC GCCACCCTGG ACTCCGGAGT CGACGTCCTG
GTGCGGCGGT TCCTCACCAA CCCGGTCACA CACAGCGTCG ACTCGACCCT GTCACCGGTT
GCCGCGATGA CGCACCACAT TCTGCACGTA CACGCCGACG ACCGGTTTGC CGTGCTGGTC
GAGCTGACGG CCGCACCGAG CCGCACCGTC GTGTTCACCC GCACCAAACG GGGCGCGAGG
ACTCTGGCCC GCCGGCTGGC CGCAGCCGGC GTGACCGCGG TCGAACTGCA TGGCAATCTG
GCCCAGGGAG CGCGTACCAG GAACCTGCGG GCCTTCGCCA CCGGGGAGGC GCACACGCTG
GTGGCCACCG ACATCGCCGC CAGGGGAATC CACATCGACG ATGTGGCACT GGTCGTACAC
GCCGACCCTC CGGTGGAGCA CAAGGCGTAC CTGCATCGCT CGGGTCGTAC CGCTCGGGCT
GGCGCGGACG GGACCGTCGT CACCTTGATG ACCGACGGGC AGGTAGCCGA GGTGCGGGCA
CTGACCCGCA AGGCGGGCAT CACAGCGACC ACGACCCGAC TGCGCCCGGG TGACGCGCTG
CTACGCGACA TCGCGCCAGG GGCACGGAAG CTGGTGCCCC AGCCCGTACC GCAGTCCGCC
GCCGCCGGAC GGCACGAGGG GCGGCCGGCC CATGGAGGCC GGGGGCAGCG GGGCGACACA
CCGGCGCAAA ACTCCTCGAG ACGGTCCGTG TCGACGCGAT CCGGTGCGGC GGCCTTCTCT
GCCCGGGCTC GTTCGGGCGG TCGTCGCCGC ACGGGACGCT AG
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| Protein sequence | MSNSLTFTDL GVPDTLDRLL SAAGVERPFP IQAATLPDAL AGRDVLGRGR TGSGKTYAFV
LAVLTRLAAS ATSRRAGRPR ALILVPTREL ATQIDSVMAP LARALSLRTM VVFGGVAARP
QITGLRAGVD VLVACPGRLA DHVQAGNAHL DAVEITVLDE ADHMADLGFL PTVRRLLERT
PHRGQRLLFS ATLDSGVDVL VRRFLTNPVT HSVDSTLSPV AAMTHHILHV HADDRFAVLV
ELTAAPSRTV VFTRTKRGAR TLARRLAAAG VTAVELHGNL AQGARTRNLR AFATGEAHTL
VATDIAARGI HIDDVALVVH ADPPVEHKAY LHRSGRTARA GADGTVVTLM TDGQVAEVRA
LTRKAGITAT TTRLRPGDAL LRDIAPGARK LVPQPVPQSA AAGRHEGRPA HGGRGQRGDT
PAQNSSRRSV STRSGAAAFS ARARSGGRRR TGR
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