Gene Sare_4608 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_4608 
Symbol 
ID5707670 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp5229117 
End bp5229884 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content69% 
IMG OID641274010 
ProductIclR family transcriptional regulator 
Protein accessionYP_001539357 
Protein GI159040104 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.249268 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.348784 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGGTC AGGTGCAGTC CATCGCGCGT GCCGCGGCGA TCCTCCGCCT GCTGGCCAGC 
AGCTCCGGCC GGCTCGGCAT CGGGGAGATC GCCCGTTCTC TCAACCTGCC CAAGGGCACG
GCGCACGGCA TCATACGTAC GCTGCAAGAC GTCGGATTCG TGGAACAGGA CAAGACCTCC
GGCAAGTACC AACTCGGTGC CACGCTGCTG CACCTCGGTA CGAGCTACCT CGACGTCAAC
GAACTCCGTT CCCGTTCCAT CAACTGGGCG GACCCACTCG CCGCGCGCAG CGGCGAGGCG
GTCCGTATCG GCACTCTGCT GGACGGCAAG GTACTTGTGG TCCACCACGT GTTCCGGCCC
GACGACACCC TCCAGACGCT GGACGTCGGG TCCCTTCTTC CCCCGCACGC CACCGCGCTC
GGCAAAGTCC TGCTCGCCTA CGACGTGGGC GCCGCCAACG CGGTTATGCA ACGCGAACCC
GAGCCCTACA CCCGACGCAC CCTGGTCACC GCACGAGCAC TCACCCGGGC CCTCAGCGAA
ATCCGGGACA ATGGCTGGGG GGCCGAAATC GGTGAGATGA CCCCTGGCGA GGCCGGCATC
GCCGCGCCGA TCCGTGGCTA TGGCGGCCTG GTCGTGGGCG CGATCGGGCT CTCCGGTCCG
GTGGACCGCA CCTGCGACGG GTCCGGCAAC CCCCGCCCAG CCCTCGTCAC GTACGTCCGC
GACGCCGCCC GCGCGGTGTC CCGCGATCTC GGCGCCACGC GCTGGTGA
 
Protein sequence
MPGQVQSIAR AAAILRLLAS SSGRLGIGEI ARSLNLPKGT AHGIIRTLQD VGFVEQDKTS 
GKYQLGATLL HLGTSYLDVN ELRSRSINWA DPLAARSGEA VRIGTLLDGK VLVVHHVFRP
DDTLQTLDVG SLLPPHATAL GKVLLAYDVG AANAVMQREP EPYTRRTLVT ARALTRALSE
IRDNGWGAEI GEMTPGEAGI AAPIRGYGGL VVGAIGLSGP VDRTCDGSGN PRPALVTYVR
DAARAVSRDL GATRW