Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_4608 |
Symbol | |
ID | 5707670 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 5229117 |
End bp | 5229884 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641274010 |
Product | IclR family transcriptional regulator |
Protein accession | YP_001539357 |
Protein GI | 159040104 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.249268 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.348784 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGGGTC AGGTGCAGTC CATCGCGCGT GCCGCGGCGA TCCTCCGCCT GCTGGCCAGC AGCTCCGGCC GGCTCGGCAT CGGGGAGATC GCCCGTTCTC TCAACCTGCC CAAGGGCACG GCGCACGGCA TCATACGTAC GCTGCAAGAC GTCGGATTCG TGGAACAGGA CAAGACCTCC GGCAAGTACC AACTCGGTGC CACGCTGCTG CACCTCGGTA CGAGCTACCT CGACGTCAAC GAACTCCGTT CCCGTTCCAT CAACTGGGCG GACCCACTCG CCGCGCGCAG CGGCGAGGCG GTCCGTATCG GCACTCTGCT GGACGGCAAG GTACTTGTGG TCCACCACGT GTTCCGGCCC GACGACACCC TCCAGACGCT GGACGTCGGG TCCCTTCTTC CCCCGCACGC CACCGCGCTC GGCAAAGTCC TGCTCGCCTA CGACGTGGGC GCCGCCAACG CGGTTATGCA ACGCGAACCC GAGCCCTACA CCCGACGCAC CCTGGTCACC GCACGAGCAC TCACCCGGGC CCTCAGCGAA ATCCGGGACA ATGGCTGGGG GGCCGAAATC GGTGAGATGA CCCCTGGCGA GGCCGGCATC GCCGCGCCGA TCCGTGGCTA TGGCGGCCTG GTCGTGGGCG CGATCGGGCT CTCCGGTCCG GTGGACCGCA CCTGCGACGG GTCCGGCAAC CCCCGCCCAG CCCTCGTCAC GTACGTCCGC GACGCCGCCC GCGCGGTGTC CCGCGATCTC GGCGCCACGC GCTGGTGA
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Protein sequence | MPGQVQSIAR AAAILRLLAS SSGRLGIGEI ARSLNLPKGT AHGIIRTLQD VGFVEQDKTS GKYQLGATLL HLGTSYLDVN ELRSRSINWA DPLAARSGEA VRIGTLLDGK VLVVHHVFRP DDTLQTLDVG SLLPPHATAL GKVLLAYDVG AANAVMQREP EPYTRRTLVT ARALTRALSE IRDNGWGAEI GEMTPGEAGI AAPIRGYGGL VVGAIGLSGP VDRTCDGSGN PRPALVTYVR DAARAVSRDL GATRW
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