Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_4586 |
Symbol | |
ID | 5705175 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 5205791 |
End bp | 5207071 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641273995 |
Product | major facilitator transporter |
Protein accession | YP_001539342 |
Protein GI | 159040089 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.101779 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00026814 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAGGGATG TTATCGGGCA ATTCGGCTCC TTCGGCCGGC CGGTACGCCT GCTTTTGATC AACCAGTTCG GCATCAATCT CGGCTTCTAC ATGCTGATGC CGTACCTCGC GAACTACCTG TCGGCGCAGC TGCTGCTCGC CGGCTGGATC GTGGGGCTCG TCCTGGGCGT ACGCAACTTC AGCCAGCAGG GCATGTTCGC CGTCGGCGGA AGCCTCGCCG ACCGGTTCGG GTACAAACCG TTGATCGTCG CTGGCTGCAC CCTGCGTACT GTCGGCTTTG CCCTTCTCGG GCTGGTCGAT TCCGTGGCTG TCCTCGTCGT CGCAGCGGCA GCCACCGGTC TGGCCGGGGC GCTGTTCAAC CCAGCGGTAC GCGCCTACCT GGCTGAGGAC GCCGGCGAAC GGCGGGTGGA GGCGTTCGCC GTGTTCAACG TCTTCTACCA GGCCGGCATC CTGGTCGGCC CGTTGGTCGG CCTTGCGCTG ACAGCGGCCG ACTTCCGCCT GACGTGCCTC GTCGCCGCCA CCGTGTTCGC CATCCTGACC GTCGCACAGG CTCGCGCACT ACCTGCTCGT GGTGGGCGAA GGGGCGAGCC AGGCGGCGGT GGGTTGGTCA GCGGGATGCT GACTTCCTGG CGGCAGGTTC TGCACAACCG ACCGTTCATG CTGTTCACCG TGGCGATGGC CGGCTCCTAC GTGCTGTCGT TTCAGGTCTA TCTCACGCTG CCCCTCACCA TCGAAGCGAA CGCTCCCAGC CCGGCGGTGG AGAAGCTCGC CGTCGCGGCC ATGTTCGCGG CCTCAGGTCT GCTTGCCGTC CTCGCACAGA TCCGGGTCAC CGCCTGGTGC CGGCGACGCT GGTCACCACA CAGCTCACTC ACCTGGGGAG TCGCGCTGCT GGGCGCGGCG TTCCTACCTG TAGCCGCGGC GAGTACCGGA CCACCCATGC TTGTCGTCGC GTCGGCCGTT CTCGCCGGAG CGATCATAGC CGTGGCGACG ATGGTGGCTT ACCCGTTCGA AATGGACATG GTGGTCACAT TGGCTGGTGA AGGTCGAATC GCCACGCACT ATGGGATCTA CAGCACCGTT TCCGGTGTCG CTGTCGCCAT CGGGAACATG CTCGCTGGCG GCGCAGTCGA CTGGGCGCGA TCTACCCAGA TGCCCATCGT GCTCTGGCTA GCGCTCGCGG CGCTCGGCGC GGCCTGCAGC ACGGCAATTC TGTGGTTGGG CAGGCGAGGC TTGTTCGGGC CTGCGGTTCC CACGAAACAA GCGACGACTG TCACCGCCTG A
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Protein sequence | MRDVIGQFGS FGRPVRLLLI NQFGINLGFY MLMPYLANYL SAQLLLAGWI VGLVLGVRNF SQQGMFAVGG SLADRFGYKP LIVAGCTLRT VGFALLGLVD SVAVLVVAAA ATGLAGALFN PAVRAYLAED AGERRVEAFA VFNVFYQAGI LVGPLVGLAL TAADFRLTCL VAATVFAILT VAQARALPAR GGRRGEPGGG GLVSGMLTSW RQVLHNRPFM LFTVAMAGSY VLSFQVYLTL PLTIEANAPS PAVEKLAVAA MFAASGLLAV LAQIRVTAWC RRRWSPHSSL TWGVALLGAA FLPVAAASTG PPMLVVASAV LAGAIIAVAT MVAYPFEMDM VVTLAGEGRI ATHYGIYSTV SGVAVAIGNM LAGGAVDWAR STQMPIVLWL ALAALGAACS TAILWLGRRG LFGPAVPTKQ ATTVTA
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