Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_4585 |
Symbol | |
ID | 5705174 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 5204787 |
End bp | 5205794 |
Gene Length | 1008 bp |
Protein Length | 335 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641273994 |
Product | pyridoxal-5'-phosphate-dependent protein beta subunit |
Protein accession | YP_001539341 |
Protein GI | 159040088 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0031] Cysteine synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.7558 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00026814 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | GTGTGGGTCG GCCGACCACT CACCTCTGCT GCCCGCGGTT TCTGGGCGAA GCTCGAGGCG TTCAGTCCCG GAGGTATCAA GGATCGCAGC GCACTGCACC TTGTGGCACA GGCGCGCAAG CGAGGTGATC TCAGCCCGGG AGCCATGATT GTCGAATCGA CCAGTGGAAC CTTCGGGTTG GGACTCGCGC TGGCAGCCAA CGCGTACCAA CATTCACTTA CGCTGGTGAC CGATCCCGGC CTTGAGCCGA TTATGCAACG GTTACTGACC GCCTCGGGAG CTGCGATCAG CGTCGTCGAC CGCCCACATC TACAGGGCGG GTGGCAGCAG GCCCGGCGGG AGCGCGTGGG CGAGATTCTG TCCGCTACCC CTGGTTCATG GTGCCCGGAC CAGTACAACA ACCCGGACAC GTTGCCCGCT TACGAGGGTC TCGGCCTGGA GCTCGTCGCA CAGCTGGGAC GCATCGATGT CCTGGTGTGC AGCGTCGGTA CGGGTGGTCA CTCCGCCGGC ACGTTCGCGC CTATACGCAG GTACTTTCCA CACGCACGGC TTGTCGGGGT CGACACCATC GGCTCAACGA TCTTCGGTCA GCCCGCGCGT CACCGGCTGA TGCGGGGGCT GGGCAGCAGC ATCTATCCCC GCAATGTCCA GTACGGCTGG TTCAGCGAGG TCCACTGGGT GGCACCTGCC GAGGCCGTGT GGGCGTGCCG GCAGCTCGCC GCACACGGCT ATGTCAGCGG CGGGTGGAGC GTTGGCGCCG TCGCCCTCGT CGCCGCCTGG CTGGCGCGGA CGTTGCCATT CGACACCCGT ATCGTGGCCG TCTTCCCAGA CGGACCACAG CGCTACTGGG ACACCGTTTT CAACGACGAC TACTGCCGAC GGCACGACCT GCTTGGCATC GAACCGGCCG CTGACCCCGA CAGCATCTGC GCCCCGACCA GCCACGAGGT CCACCGGTGG ACCCGCTGCA CCCAGATCGT TGACCTCGGG CAGAGTGATC GGCGATGA
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Protein sequence | MWVGRPLTSA ARGFWAKLEA FSPGGIKDRS ALHLVAQARK RGDLSPGAMI VESTSGTFGL GLALAANAYQ HSLTLVTDPG LEPIMQRLLT ASGAAISVVD RPHLQGGWQQ ARRERVGEIL SATPGSWCPD QYNNPDTLPA YEGLGLELVA QLGRIDVLVC SVGTGGHSAG TFAPIRRYFP HARLVGVDTI GSTIFGQPAR HRLMRGLGSS IYPRNVQYGW FSEVHWVAPA EAVWACRQLA AHGYVSGGWS VGAVALVAAW LARTLPFDTR IVAVFPDGPQ RYWDTVFNDD YCRRHDLLGI EPAADPDSIC APTSHEVHRW TRCTQIVDLG QSDRR
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