Gene Sare_4569 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_4569 
Symbol 
ID5705352 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp5186851 
End bp5187645 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content70% 
IMG OID641273981 
Product4-oxalocrotonate decarboxylase 
Protein accessionYP_001539328 
Protein GI159040075 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3971] 2-keto-4-pentenoate hydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00147074 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACGGCCG TCGCGCGGAC GTTGCACCGC GAACTTGCCG TGGAGCTCTG GGAGGCCGCC 
CGGACCCGTC GGCCGGTCCC GCCGCTGTCG GTCCGGCACC CGCGACTCGA CCTGGCGGAC
GCGTACGCGA TCCAGAGCGA GATCCGGGCG CTCGAACTGG CCGGTGGTGC CCGGCTCGCC
GGCCTGAAGA TCGGCGCCAC CAGCGAGGCA ATCCAGAAGA TGTTCGGCAT CGATCATCCT
GACTTCGGCT ATCTGACCGA TCGCATGCTG CTGCCCGACG GCGTCGCTCT GGACGTGCGT
ACGTTCATCG CACCGAAGGT CGAGGGCGAG ATCGCCTTCC GGATGGCCCG GGATCTGAGC
GGCCCGGCGG TCACGGCCCA GGACGTTCTC GCGGCCACCA CCGAGATCTG CCCGGTCCTG
GAGGTCCTCG ACAGCCGGAT CGAGGCTTGG AAGATCGGCC TGGTGGACAC CGTCGCCGAC
AACGCGTCTT CCGCAGCGGT CGTGGTCGGC GCCGGCGTCC CGCCGGACAC GACCGACCTC
GCGGCGGCGC GGATGGTGCT GCGCAGCGGT GACGCCGAAT ACACCGGGAC CGGCTCGGCC
GTCATGGGGC ATCCCGCCGA GTCGGTGGCG TGCCTGGTCC GGATCCTGGC GGAGTTCGGC
ACCGGGGTCA GCGCCGGCAA GCTCGTGCTG GCCGGCTCCT GGGCCGGCGC GGTGGATCTG
GTGCCGGGGG AACAGGTTCA CGCCTCATTC GGCGTTCTGG GATCGGTCTC CATGACCTAC
GGATCAGAAG GTTAG
 
Protein sequence
MTAVARTLHR ELAVELWEAA RTRRPVPPLS VRHPRLDLAD AYAIQSEIRA LELAGGARLA 
GLKIGATSEA IQKMFGIDHP DFGYLTDRML LPDGVALDVR TFIAPKVEGE IAFRMARDLS
GPAVTAQDVL AATTEICPVL EVLDSRIEAW KIGLVDTVAD NASSAAVVVG AGVPPDTTDL
AAARMVLRSG DAEYTGTGSA VMGHPAESVA CLVRILAEFG TGVSAGKLVL AGSWAGAVDL
VPGEQVHASF GVLGSVSMTY GSEG