| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_4564 |
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| Symbol | |
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| ID | 5705422 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | + |
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| Start bp | 5182167 |
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| End bp | 5182757 |
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| Gene Length | 591 bp |
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| Protein Length | 196 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641273976 |
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| Product | isopentenyl-diphosphate delta-isomerase |
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| Protein accession | YP_001539323 |
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| Protein GI | 159040070 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1443] Isopentenyldiphosphate isomerase |
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| TIGRFAM ID | [TIGR02150] isopentenyl-diphosphate delta-isomerase, type 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.669276 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00145949 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGCTCGCGA CCAACGACGT GAGCGGGACC AACGCCCCGG AACCCGGGCG TGACCTGCTC
GAGCTGGTGG ACACCATAGG ACGGACCGTC GGGGTGCTCG ACAAGCTGGC CGCCCACACG
AGTCCCGGCC ATCTGCACCG GGCGTTCTCC GTGTTCCTCT TCGACGACGA GGAGCGCCTG
CTGCTACAGC GACGGGCGCT GGGCAAGTAC CACTCGCCGG GGGTGTGGTC CAACACCTGT
TGCGGCCACC CCTTCCCCGG GGAGGCGCCG GACGCCGCGG CCGCCCGTCG GGTCCGGGAG
GAGCTGGGCA TGACCCCGGT CGGTCTCGCG GCCGCCGGGA CCGTGCTGTA CGAGTTGCCG
GACCCGAAGT CGGGCCTGAT CGAGCGCGAG TACAACCACG TGTTCGTGGG CCGGTTCCGG
GACGAGCCGC GACCCGATCC CGCGGAGGTC GCGGAGTGGA CGCTGGTCGC ACCCGGCCAA
CTGCGTGACA TGCGGGACCG GCTGGAGTTC TCGGTGTGGT TCCCGGCCGT GATCGGACGC
GTCGCCGAGA CGGGACGTGT CGCAGACCTT CATCTGGACG CGTGGCGCTG A
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| Protein sequence | MLATNDVSGT NAPEPGRDLL ELVDTIGRTV GVLDKLAAHT SPGHLHRAFS VFLFDDEERL
LLQRRALGKY HSPGVWSNTC CGHPFPGEAP DAAAARRVRE ELGMTPVGLA AAGTVLYELP
DPKSGLIERE YNHVFVGRFR DEPRPDPAEV AEWTLVAPGQ LRDMRDRLEF SVWFPAVIGR
VAETGRVADL HLDAWR
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