Gene Sare_4551 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_4551 
Symbol 
ID5705813 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp5143683 
End bp5144477 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content67% 
IMG OID641273963 
ProductABC-2 type transporter 
Protein accessionYP_001539310 
Protein GI159040057 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID[TIGR00025] ABC transporter efflux protein, DrrB family 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.442888 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0220595 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCA CTGCCGAGAC GTCCCGGTCG AGGCCGCTCG GGCTGGTGCG GCACAGCGCC 
GTCCTGGCCA AGCGAAGCCT GGTCAAGACC AAGCGCAGCC CCGGCTACCT GATCAACGGG
GTGATGACCC CAGTGATCTT CTTGGTGCTG TTCCTGTACC TGTTCGGCGG GGCGGTGTCC
GGGTCCACCG ACAGCTACCT GCAGTACCTC TTCCCCGGCA TCCTTGTGAT GACCACCAGC
CTCTCCGGGA TGCTGGCCAC GGGGCTGAAC CTCAACATCG ACGTCAAGAA GGGCATCTTT
GATCGCTTCC GGAGCCTGCC CATCGACCGC GCGGCGCCGC TCCTCGGTTC CGTCGCCGCC
GACGTCGTCC GGTACGTGGT CGCTGTGGTC ATCCTGTTCG GCATCGGGTA CGCGCTCGGG
TTCCGGGTGC AGAGCGACCC GCTGTCGACG CTCGCCGCCG TGCTGCTGGC CGTCGCTTTC
GGCTTCTGCC TCAGTTGGGT CACGGTGTTC CTCGGCGTTC TCGTCCGGGA CGAGGGCGCG
GTGCTCGCGT TCTCGTTCGT CGCCTTCCTG CCGCTGGTTC TCGGGACGAG CCTGTCGGCA
CCGGTCGACA CGCTGCCGGG GTGGCTGCGA GCTTGGGCGA ACGTCAACCC GGTCACGCAC
GCCATGGACG CCTGCCGTGC GCTGCTCAAC GGCGGTGCTG CCGGCGACGC GGTCACCCAG
ACCTTGATCT GGTCGGCTGT CCTGCTCGTG ATCTTCTGCC CGTTGGCCGT GCTCGCCTAC
CAGCGTCGGG AGTGA
 
Protein sequence
MTTTAETSRS RPLGLVRHSA VLAKRSLVKT KRSPGYLING VMTPVIFLVL FLYLFGGAVS 
GSTDSYLQYL FPGILVMTTS LSGMLATGLN LNIDVKKGIF DRFRSLPIDR AAPLLGSVAA
DVVRYVVAVV ILFGIGYALG FRVQSDPLST LAAVLLAVAF GFCLSWVTVF LGVLVRDEGA
VLAFSFVAFL PLVLGTSLSA PVDTLPGWLR AWANVNPVTH AMDACRALLN GGAAGDAVTQ
TLIWSAVLLV IFCPLAVLAY QRRE