Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_4551 |
Symbol | |
ID | 5705813 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 5143683 |
End bp | 5144477 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641273963 |
Product | ABC-2 type transporter |
Protein accession | YP_001539310 |
Protein GI | 159040057 |
COG category | [V] Defense mechanisms |
COG ID | [COG0842] ABC-type multidrug transport system, permease component |
TIGRFAM ID | [TIGR00025] ABC transporter efflux protein, DrrB family |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.442888 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0220595 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACCA CTGCCGAGAC GTCCCGGTCG AGGCCGCTCG GGCTGGTGCG GCACAGCGCC GTCCTGGCCA AGCGAAGCCT GGTCAAGACC AAGCGCAGCC CCGGCTACCT GATCAACGGG GTGATGACCC CAGTGATCTT CTTGGTGCTG TTCCTGTACC TGTTCGGCGG GGCGGTGTCC GGGTCCACCG ACAGCTACCT GCAGTACCTC TTCCCCGGCA TCCTTGTGAT GACCACCAGC CTCTCCGGGA TGCTGGCCAC GGGGCTGAAC CTCAACATCG ACGTCAAGAA GGGCATCTTT GATCGCTTCC GGAGCCTGCC CATCGACCGC GCGGCGCCGC TCCTCGGTTC CGTCGCCGCC GACGTCGTCC GGTACGTGGT CGCTGTGGTC ATCCTGTTCG GCATCGGGTA CGCGCTCGGG TTCCGGGTGC AGAGCGACCC GCTGTCGACG CTCGCCGCCG TGCTGCTGGC CGTCGCTTTC GGCTTCTGCC TCAGTTGGGT CACGGTGTTC CTCGGCGTTC TCGTCCGGGA CGAGGGCGCG GTGCTCGCGT TCTCGTTCGT CGCCTTCCTG CCGCTGGTTC TCGGGACGAG CCTGTCGGCA CCGGTCGACA CGCTGCCGGG GTGGCTGCGA GCTTGGGCGA ACGTCAACCC GGTCACGCAC GCCATGGACG CCTGCCGTGC GCTGCTCAAC GGCGGTGCTG CCGGCGACGC GGTCACCCAG ACCTTGATCT GGTCGGCTGT CCTGCTCGTG ATCTTCTGCC CGTTGGCCGT GCTCGCCTAC CAGCGTCGGG AGTGA
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Protein sequence | MTTTAETSRS RPLGLVRHSA VLAKRSLVKT KRSPGYLING VMTPVIFLVL FLYLFGGAVS GSTDSYLQYL FPGILVMTTS LSGMLATGLN LNIDVKKGIF DRFRSLPIDR AAPLLGSVAA DVVRYVVAVV ILFGIGYALG FRVQSDPLST LAAVLLAVAF GFCLSWVTVF LGVLVRDEGA VLAFSFVAFL PLVLGTSLSA PVDTLPGWLR AWANVNPVTH AMDACRALLN GGAAGDAVTQ TLIWSAVLLV IFCPLAVLAY QRRE
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