Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_4509 |
Symbol | |
ID | 5707030 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 5097782 |
End bp | 5098873 |
Gene Length | 1092 bp |
Protein Length | 363 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641273923 |
Product | pyridoxal-5'-phosphate-dependent protein beta subunit |
Protein accession | YP_001539272 |
Protein GI | 159040019 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0031] Cysteine synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.263951 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.00963798 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGACTCAAC TGGATCGGTG CGACGACGCT GTTCGGGGGT GGGTGACCGA GGCGATCGCC GCCGTGGAGG CGGACGCCAA CCGGTCCGCC GACACCCACC TGCTGCCGTT TCCACTACCT CGGCGGTGGG GAATCGACCT CTACCTCAAG GACGAGTCGG TGCACCCGAC TGGTTCCCTG AAGCACCGGC TGGCCCGGTC GCTGTTCTTC TACGGGCTCT GCAACGGTTG GATCGGTCCG GACACCACGA TCGTGGAGGC CTCCTCAGGG TCGACGGCGG TGTCCGAGGC ATACTTCGCC CGGATGCTCG GGTTGCCGTT CATCGCGGTG ATGCCGGCGT CCACCTCGGC GGAAAAGATC GCCAAAATCG AGTTCCAGGA GGGGCGCTGT CACCTGGTGG ACGACCCGGC CAAGGTGGTC GTCGAGGCAC GCTGGCTGGC CGAGGACACC GGCGGCCACT TCATGGACCA GTTCACCTAT GCCGAGCGGG CCACCGACTG GCGGGGCAAC AACAACATCG CCGAGTCGAT CTTCTCGCAG CTCGCTCTGG AACGGCACCC GGTGCCGGCG TGGATCGTGG TCGGTGCCGG CACCGGCGGC ACCAGCGCCA CCATCGGCCG GTACGCGCGC TACCGTCGGC TGCCCACCAA ACTCTGCGTG GTGGACCCGG AGAACTCGGC GTTCTACCCG GCCTGGCAGA CATCCGACTG GTCGGTGCGC ACCGGCCGCG GCTCCCGAAT CGAGGGCATC GGGCGACCGA CCGTGGAAGC ATCCTTCCTG CCGGCGGTGG TCGACCGGAT GGTGCAGGTG CCCGACGCCG CCTCGTTGGC CGCGATGCGG GCTGGCTCCG ACGTGCTGGG CCGTCGGGTC GGTGGCTCGA CCGGCACCAA CCTCTGGGGC GCCTTCGGGC TGATCGCCGG ACTGCTCGCG GCCGGGCAGT CCGGCTCGGT GGTCACCCTG ATCTGCGACG CCGGGGACCG CTACGCCGAC ACCTACTACG CCGACGACTG GGTCAGCGCC CAGGGGCTCG ACCTGTCGCC GCACCTGGCG ACCATCGAGC GTTTCCTGGA CACCGGCGCC TGGCCGGCCT GA
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Protein sequence | MTQLDRCDDA VRGWVTEAIA AVEADANRSA DTHLLPFPLP RRWGIDLYLK DESVHPTGSL KHRLARSLFF YGLCNGWIGP DTTIVEASSG STAVSEAYFA RMLGLPFIAV MPASTSAEKI AKIEFQEGRC HLVDDPAKVV VEARWLAEDT GGHFMDQFTY AERATDWRGN NNIAESIFSQ LALERHPVPA WIVVGAGTGG TSATIGRYAR YRRLPTKLCV VDPENSAFYP AWQTSDWSVR TGRGSRIEGI GRPTVEASFL PAVVDRMVQV PDAASLAAMR AGSDVLGRRV GGSTGTNLWG AFGLIAGLLA AGQSGSVVTL ICDAGDRYAD TYYADDWVSA QGLDLSPHLA TIERFLDTGA WPA
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