Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_4501 |
Symbol | |
ID | 5707387 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 5087799 |
End bp | 5088737 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641273915 |
Product | periplasmic binding protein |
Protein accession | YP_001539264 |
Protein GI | 159040011 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.927448 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0870716 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCAGAC GTGCTCCGCG GCTTCTCACC GCAGCCCTCG CGGTGGCCGC GCTCGCGCTC GGCGGCTGCG CCGAGAAGAC CACCGACACC CCGGCGCCCA GCGGCGGCGC ATCCACCGCC GCGACCTTCC CGGTGACAGT CGGCTCGCTG ACCCTGGAAC AGCGGCCGGA GAAGATCGTC TCGTTGTCAC CGACCGCCAC CGAGATGCTC TTCGCGATCG GTGCGGGACC GCAGGTCACA GCGGCCGACG ACAACTCGAA TCACCCGGCG GAGGCACCGC GGACCGACCT CTCCGGCTTC CAGCCGAACG CCGAGGCGAT CGCCGCCAAG GATCCCGACC TGGTGGTAAT CGCCAGCGAC CGCAACAAGG TCGTCGACCA GCTCACCAAG CTGAAGATCC CGGTCTTCCT CACCCCGGCG GCGGTCACGC TGGACGACAC CTACCGGCAG CTCACCGAAC TGGGCACACT CACCGGGCAC CCCACCGAGG CCGCGGACGT GGTCACCGGG ATGAAGGACG ACATCGCGAA GCTTGTCGCC GACCTGCCAC AGCGGGCCGA AAAGCTCACC TACTTCCACG AGCTGAGCCC CGACCTGTAC ACCGCCACCA GCAAGACCTT CATCGGCTCG CTCTACACGC TCGTCGGGCT CGAGAACATC GCCGACCCGG CCGACGCGGA CGGGGAGAGC GGCGGCTACC CGCAGCTCTC CGAGGAGATC ATCGTCGAGG CCAACCCGGA CTTCGTCTTC CTCGCCGACA CCAAGTGCTG CCAGCAGAGC GTGGAGACGG TGCAGGCCCG GCCCGGCTGG GCGACGATCA CCGCCGTCCG AGAGAACCAG ATCGTCGCGC TCGACGACGA CATCGCCTCA CGGTGGGGCC CGCGCGTCGT CGACCTGCTC CGCACGATCA TCGACGCGAC CGCCAAGGTC CCCGCGTGA
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Protein sequence | MSRRAPRLLT AALAVAALAL GGCAEKTTDT PAPSGGASTA ATFPVTVGSL TLEQRPEKIV SLSPTATEML FAIGAGPQVT AADDNSNHPA EAPRTDLSGF QPNAEAIAAK DPDLVVIASD RNKVVDQLTK LKIPVFLTPA AVTLDDTYRQ LTELGTLTGH PTEAADVVTG MKDDIAKLVA DLPQRAEKLT YFHELSPDLY TATSKTFIGS LYTLVGLENI ADPADADGES GGYPQLSEEI IVEANPDFVF LADTKCCQQS VETVQARPGW ATITAVRENQ IVALDDDIAS RWGPRVVDLL RTIIDATAKV PA
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