Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_4500 |
Symbol | |
ID | 5707386 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 5086674 |
End bp | 5087765 |
Gene Length | 1092 bp |
Protein Length | 363 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 641273914 |
Product | transport system permease protein |
Protein accession | YP_001539263 |
Protein GI | 159040010 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0609] ABC-type Fe3+-siderophore transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.744299 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.246741 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGCAGG TGATCACCAG GAGTCCCGCG CGCCCCGCGG CTGAGGCTCG GCCGGCCGGG CTGCGGCCCG GCTGGCTCCT CGCCGGGCTG GCCGCGGTAC TGGCCGCCCT GGTGGCGGGT GTGTCCCTCG GCCCGGTCAG CCTGCCGCCG GGCAGCGTCG CGGTCGAGCT GCTGAACCTC CTTCCCGGGG TACGCGTCGA CAGCGGCCTC ACCGAGCGGG AGATCGCCAT TGTCACCGAG CTGCGGCTGC CCCGGGCCGT GCTCGGCCTG CTCGTCGGTG GGCTGCTGGC CCTGGCCGGC GGCGCCTACC AGGGCGTGTT CCGCAACCCG CTGGCCGACC CGTACCTGCT CGGTGTCGCG GCCGGCGCCG GGTTCGCGGT CACCGTGGTG ATCACCGCCG GGGTCGGGGG CCAGGCGGTC ATGGCGGTGC TGCCGGTCAC CGTCCCGCTG GCCGCGTTCG TCGGCGCGAT CGGCGCGGTC GGGCTGACCT ACCTGCTCGG CGCCTCCGGC GGCCGGAACC GATCACCGGC GACCCTGATC CTGGCCGGGG TAGCGGTCTC CGCGTTCCTC TCCGCCGGGC AGACCTACCT GCTGCAACGT AACGCGGAGA GCATTCAGCA GGTCTATGCC TGGCTGCTCG GGCGACTCGC CACCGCTGGC TGGCACGACG TGCGGCTGGT CCTGCCGTAC TTCCTGCTGA CCGCCGTGGT GGTCCTGCTG CACCGGCGTG AGCTGGACGT GCTCTCGGTC GGCGACGACG AGGCGACCAG CCTGGGCCTG CACCCGCAAC GGTCCCGCTA CCTGCTGATC GCCGCCGCCT CGCTCGGCAC CGCCGCGGCG GTCTCCGCGT CCGGGCTGAT CGGCTTCGTC GGGATCATCG TGCCGCATGC CGTACGACTG CTCGCCGGGT CCAGCTACCG GGTGATCCTG CCGTTGTCGA TGCTCTTCGG CGGGGCGTTC CTGGCCCTGA CCGACGTGGT CGCCCGTACC GCCGCCGCCC CCGAGGAGAT TCCGATCGGC GTGGTGACCG CCCTGCTCGG CGGTCCGTTC TTCGTCCTGG TCCTGCGCAG CGCCCGGCGG GTGCTGGAAT GA
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Protein sequence | MRQVITRSPA RPAAEARPAG LRPGWLLAGL AAVLAALVAG VSLGPVSLPP GSVAVELLNL LPGVRVDSGL TEREIAIVTE LRLPRAVLGL LVGGLLALAG GAYQGVFRNP LADPYLLGVA AGAGFAVTVV ITAGVGGQAV MAVLPVTVPL AAFVGAIGAV GLTYLLGASG GRNRSPATLI LAGVAVSAFL SAGQTYLLQR NAESIQQVYA WLLGRLATAG WHDVRLVLPY FLLTAVVVLL HRRELDVLSV GDDEATSLGL HPQRSRYLLI AAASLGTAAA VSASGLIGFV GIIVPHAVRL LAGSSYRVIL PLSMLFGGAF LALTDVVART AAAPEEIPIG VVTALLGGPF FVLVLRSARR VLE
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