Gene Sare_4500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_4500 
Symbol 
ID5707386 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp5086674 
End bp5087765 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content74% 
IMG OID641273914 
Producttransport system permease protein 
Protein accessionYP_001539263 
Protein GI159040010 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0609] ABC-type Fe3+-siderophore transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.744299 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.246741 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGCAGG TGATCACCAG GAGTCCCGCG CGCCCCGCGG CTGAGGCTCG GCCGGCCGGG 
CTGCGGCCCG GCTGGCTCCT CGCCGGGCTG GCCGCGGTAC TGGCCGCCCT GGTGGCGGGT
GTGTCCCTCG GCCCGGTCAG CCTGCCGCCG GGCAGCGTCG CGGTCGAGCT GCTGAACCTC
CTTCCCGGGG TACGCGTCGA CAGCGGCCTC ACCGAGCGGG AGATCGCCAT TGTCACCGAG
CTGCGGCTGC CCCGGGCCGT GCTCGGCCTG CTCGTCGGTG GGCTGCTGGC CCTGGCCGGC
GGCGCCTACC AGGGCGTGTT CCGCAACCCG CTGGCCGACC CGTACCTGCT CGGTGTCGCG
GCCGGCGCCG GGTTCGCGGT CACCGTGGTG ATCACCGCCG GGGTCGGGGG CCAGGCGGTC
ATGGCGGTGC TGCCGGTCAC CGTCCCGCTG GCCGCGTTCG TCGGCGCGAT CGGCGCGGTC
GGGCTGACCT ACCTGCTCGG CGCCTCCGGC GGCCGGAACC GATCACCGGC GACCCTGATC
CTGGCCGGGG TAGCGGTCTC CGCGTTCCTC TCCGCCGGGC AGACCTACCT GCTGCAACGT
AACGCGGAGA GCATTCAGCA GGTCTATGCC TGGCTGCTCG GGCGACTCGC CACCGCTGGC
TGGCACGACG TGCGGCTGGT CCTGCCGTAC TTCCTGCTGA CCGCCGTGGT GGTCCTGCTG
CACCGGCGTG AGCTGGACGT GCTCTCGGTC GGCGACGACG AGGCGACCAG CCTGGGCCTG
CACCCGCAAC GGTCCCGCTA CCTGCTGATC GCCGCCGCCT CGCTCGGCAC CGCCGCGGCG
GTCTCCGCGT CCGGGCTGAT CGGCTTCGTC GGGATCATCG TGCCGCATGC CGTACGACTG
CTCGCCGGGT CCAGCTACCG GGTGATCCTG CCGTTGTCGA TGCTCTTCGG CGGGGCGTTC
CTGGCCCTGA CCGACGTGGT CGCCCGTACC GCCGCCGCCC CCGAGGAGAT TCCGATCGGC
GTGGTGACCG CCCTGCTCGG CGGTCCGTTC TTCGTCCTGG TCCTGCGCAG CGCCCGGCGG
GTGCTGGAAT GA
 
Protein sequence
MRQVITRSPA RPAAEARPAG LRPGWLLAGL AAVLAALVAG VSLGPVSLPP GSVAVELLNL 
LPGVRVDSGL TEREIAIVTE LRLPRAVLGL LVGGLLALAG GAYQGVFRNP LADPYLLGVA
AGAGFAVTVV ITAGVGGQAV MAVLPVTVPL AAFVGAIGAV GLTYLLGASG GRNRSPATLI
LAGVAVSAFL SAGQTYLLQR NAESIQQVYA WLLGRLATAG WHDVRLVLPY FLLTAVVVLL
HRRELDVLSV GDDEATSLGL HPQRSRYLLI AAASLGTAAA VSASGLIGFV GIIVPHAVRL
LAGSSYRVIL PLSMLFGGAF LALTDVVART AAAPEEIPIG VVTALLGGPF FVLVLRSARR
VLE