Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_4493 |
Symbol | |
ID | 5707379 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 5078466 |
End bp | 5079173 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641273907 |
Product | hypothetical protein |
Protein accession | YP_001539256 |
Protein GI | 159040003 |
COG category | [R] General function prediction only |
COG ID | [COG4106] Trans-aconitate methyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.809793 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCATTG ACATCCTGGA GATCGCGCTA CGAGATCCGC ACCCCGACGC CGCGCTCATC GTCGAGCGCA GCGACGGCCA CCGCAGCGTC ACCGACCTGG CCTGGTGGCG CCGGGAACCA GCGGCCCGGC CACCCGTCGA CACCGAAATC CTGGACTGGG TCAAGCCAGG CCAGTCCGTC GCGGACGTCG GTTGCGCCAC CGGCCGCCAC TTGGAAATCC TTCGCAGCCG GGGCATCGCC GGTATCGGCG TGGACTCCTG CGCAACCGCG GTGGCACTCG CCGCGGCCCG CGGGCTCACC GCAGTCCACG CGGACGCCAC AGCCTGGTCC CCTCCCGAGC CCGTCAACGT CGTGACCGCA CTCGGCGGCG GCCTCGGCAT CTGCGGCACC CTCGAAAAGC TTGGCACGTG GCTCGCCCAC CTGGCCCGAT GGATGGCGCC CGCCGGCCGC CTGCTCGTCA CCACCGTCGA CTGGCGCGGA CCCGGCCATG CGGCGTGGGG CGAAGCCGCA CAGAGCCGCG ACGCGTACCC GGGCGAGGTG ACTCTCCGTC TGCGCTACCG CGATCAGACC GGAGACTGGT TCCCCTGGCT CTGGGCCGAT CCGCCCACTC TCCACGCGTA CGCACAGAAG GCCGGGCTGA CCATGGTGAA GACGATGGCC TGGGGCGCGA AGTACGCCGC CGAGCTGCGC AAGGAGCCCA TGCCATGA
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Protein sequence | MTIDILEIAL RDPHPDAALI VERSDGHRSV TDLAWWRREP AARPPVDTEI LDWVKPGQSV ADVGCATGRH LEILRSRGIA GIGVDSCATA VALAAARGLT AVHADATAWS PPEPVNVVTA LGGGLGICGT LEKLGTWLAH LARWMAPAGR LLVTTVDWRG PGHAAWGEAA QSRDAYPGEV TLRLRYRDQT GDWFPWLWAD PPTLHAYAQK AGLTMVKTMA WGAKYAAELR KEPMP
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