| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_4455 |
|---|
| Symbol | |
|---|
| ID | 5704946 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | - |
|---|
| Start bp | 5034121 |
|---|
| End bp | 5034756 |
|---|
| Gene Length | 636 bp |
|---|
| Protein Length | 211 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641273871 |
|---|
| Product | NADH dehydrogenase subunit I |
|---|
| Protein accession | YP_001539220 |
|---|
| Protein GI | 159039967 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1143] Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) |
|---|
| TIGRFAM ID | [TIGR01971] NADH-quinone oxidoreductase, chain I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.829117 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.833546 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCGCGA TCTCCGGAAC GTTCAAGGGC TTCGGGGTCA CCTTCTCGCA CATGTTCAAG
AAGGTTGTCA CCACCGACTA CCCGTTCAAG CCGCCGGTCG CGGCACCCCG CTATCACGGG
CGGCACATCC TCAACCGGCA TCCCGACGGC CTGGAGAAGT GCATCGGCTG CGAGTTGTGT
GCCTGGGCCT GCCCGGCGGA CGCGATCTAC GTGGAGGGTG GCGACAACAC CGAGGAGCAG
CGTTTCTCCC CGGGCGAGCG GTACGCCAGC GTCTACCAGA TCAACTACGC CCGGTGTATC
TTCTGCGGAC TCTGCATCGA GGCGTGCCCG ACCCGCTCGT TGACCATGAG CAACGAGTAC
GAGCTGGCCC GCGACAACCG GCAGGACCTG ATCTTCACCA AGGAGCAGCT CCTGGCGCCG
CTGCTGTCGG GCATGGAACA GCCGCCGCAC CCGATGCGGC TGGGTGACAG CGAGAAGGAC
TACTACGTCG GCGCGTTGGA GAACCCGGGC ACCTCGGCCG GGGCGGAACG TTCGCCGATG
GGCCCCGGCC GCTACCGGCT CAGCGAGCAC CCCGGTGTGC AGTTCCCCGG CGCCGAGCAG
GCCGCAGAAC GGGCGGACAA GGGAGACGGA GCATGA
|
|---|
| Protein sequence | MGAISGTFKG FGVTFSHMFK KVVTTDYPFK PPVAAPRYHG RHILNRHPDG LEKCIGCELC
AWACPADAIY VEGGDNTEEQ RFSPGERYAS VYQINYARCI FCGLCIEACP TRSLTMSNEY
ELARDNRQDL IFTKEQLLAP LLSGMEQPPH PMRLGDSEKD YYVGALENPG TSAGAERSPM
GPGRYRLSEH PGVQFPGAEQ AAERADKGDG A
|
|---|
| |