| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_4450 |
|---|
| Symbol | |
|---|
| ID | 5704941 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | - |
|---|
| Start bp | 5027906 |
|---|
| End bp | 5029459 |
|---|
| Gene Length | 1554 bp |
|---|
| Protein Length | 517 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641273866 |
|---|
| Product | NADH dehydrogenase subunit N |
|---|
| Protein accession | YP_001539215 |
|---|
| Protein GI | 159039962 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1007] NADH:ubiquinone oxidoreductase subunit 2 (chain N) |
|---|
| TIGRFAM ID | [TIGR01770] proton-translocating NADH-quinone oxidoreductase, chain N |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0681298 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGAGC TGAAGCTTCC GTCGATTGAC TACGTGGCGC TTGCGCCGAC GCTCATCCTG
CTGGGCGCCG CACTCGTCGG CGTCTTGGTC GAGGCGTTCG TGCCGCGCCG GCTGCGGCAC
ATGGTGCAGC TCACGGTGGC GATGCTGGCG GTTCTGAGCG CGCTGACCAT GGTGGTGGTC
AACGCCAACG ATCGCCTGAT CACCATCGGC GGGGCGATCG CCGTGGATGG GCCGGCACTC
TTCCTCCAGG GCGCGATCCT GGTGTTGGCC GCGATGGCCC TGCTGCTCAT CGGCGAGCGT
TCGGTCGAGC GCGGCGGGGC GTTCGTGGCC CAGGCGGCGG TGACCGCCGA GTCGGCCGAC
GACCGCCGGC AGGCGGAGGG TAGGCCCGGC GCGACCGAGG TGTATCCGCT GACCAGCTTC
GCGGTCGGCG GAATGTTGAT CTTTGTGGCC GCGAACGACC TACTGACCAT GTTCATCGCG
CTCGAGGTTC TCTCGCTGCC GCTCTATCTG CTCTGCGCAC TGGCTCGCCG CCGGCGGTTG
CTGAGCCAGG AGGCGGCCAT GAAGTACTTC CTGCTCGGCG CGTACGCCTC GGCGTTCTTC
CTCTTCGGCG TCGCGCTGGT GTACGGCTAC ACCGCCGGTG TCCCGGACCG GGCGGCGGGG
GTCGACTTCG CCACCATCGA CGCGGCCGTC TCCGAGAGTC AGTCCAGTTC GGTGCTGCTC
TTCGGCGGCA TGGCGCTGAT CGCCATCGGC CTGCTGTTCA AGGCCGCCGC CGCGCCGTTC
CACGTCTGGA CGCCGGACGT CTATCAGGGT GCGCCCACCC CGATCACCGG CTTCATGGCG
GCCTGCACGA AGGTCGCCGC GTTCGGCGCC CTGCTGCGGG TCTTCCACGT GGCCTTCGAG
GGAGCCCGCT GGGACTTCAC TCCCATCCTC GGCGTGGTGG CGGTGCTGAC CATGCTCGTC
GGGGCGGTGC TGGCGGTCAC CCAGACCGAC ATCAAGCGGC TGCTCGCGTA CTCGTCGATC
GCCAACGCCG GGTACCTGCT GGTGGGCGTG CTGGCGCCGT CCAGCGAGGG CGTCTCCGGG
ACGATGTTCT ACCTGGTTGC CTATGGCTTC TCGGTGCTGG CCGCGTTCGC CGTGGTCACC
CTGGTCCGGG ACGGGGACGG GGAGGCCACC CACCTGTCCC GTTGGGCGGG CCTGGGTCAG
CGCTCGCCGT TCTACGCCGG GCTGTTCACC TTCATCCTGC TCGCCTTCGC CGGAATCCCG
CTGACCAGCG GGTTCACCAG CAAGTTCGCG GTCTTCAGCG CAGCCTTCGA CGGTGGCCAG
GGATGGCTGG TGGTCGCCGG CGTGTTGACC AGCATGGTGC TCGCCTTCCC GTACCTGCGG
GTGGTCGTGC TGATGTGGCT CTCCGAGCCC GGTGAGTCCA CGCCGGCCGT CGTCATGCCG
GGCTGGCTGA CCTCGGCCGC GCTGACGATC GGGGTGGTTG CCACCCTGGT CCTCGGCGTC
GTCCCGCAAC CGCTGCTCGA TCTCGCCGCA GGGGCCGCCG AGTTCGTGCG GTGA
|
|---|
| Protein sequence | MSELKLPSID YVALAPTLIL LGAALVGVLV EAFVPRRLRH MVQLTVAMLA VLSALTMVVV
NANDRLITIG GAIAVDGPAL FLQGAILVLA AMALLLIGER SVERGGAFVA QAAVTAESAD
DRRQAEGRPG ATEVYPLTSF AVGGMLIFVA ANDLLTMFIA LEVLSLPLYL LCALARRRRL
LSQEAAMKYF LLGAYASAFF LFGVALVYGY TAGVPDRAAG VDFATIDAAV SESQSSSVLL
FGGMALIAIG LLFKAAAAPF HVWTPDVYQG APTPITGFMA ACTKVAAFGA LLRVFHVAFE
GARWDFTPIL GVVAVLTMLV GAVLAVTQTD IKRLLAYSSI ANAGYLLVGV LAPSSEGVSG
TMFYLVAYGF SVLAAFAVVT LVRDGDGEAT HLSRWAGLGQ RSPFYAGLFT FILLAFAGIP
LTSGFTSKFA VFSAAFDGGQ GWLVVAGVLT SMVLAFPYLR VVVLMWLSEP GESTPAVVMP
GWLTSAALTI GVVATLVLGV VPQPLLDLAA GAAEFVR
|
|---|
| |