Gene Sare_4448 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_4448 
Symbol 
ID5704939 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp5025622 
End bp5026404 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content70% 
IMG OID641273864 
ProductIclR family transcriptional regulator 
Protein accessionYP_001539213 
Protein GI159039960 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0345876 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCGACC CCTTGGCGGA ACCTTCGGAC CTGATCCGGA GCGTGTCCCG CGCGCTACGA 
GTGCTTGAGT CGGTCGGCCG TGCTCCGAAA GGGCTGACCG TCAAACAGAT CGCGCGACGG
TGTGAGCTGA CCGTGGCCAC CACCTACCAC CTCGTCCGCA CCCTGGCCTA CGAGGGCTAC
GTGATCCGGC GCGAGGACGG TACCTACATC GTGGGCCTGG AGGTGGCCGA CCGCTACCGT
GAGCTGGTCG CCGCCTTCCG CGGCCCACCG GCGGTCGGGG AGTCCCTCCG GCGTGCCGTC
CTCGACACCG GCTACAGCCA CTTCCTGGGC AAGTTCATCG GTGGTCAGGT CGCCATCACG
GCCGTCACCG AAGGTCCACG CTCACCGTAC CTGGAGGACC TGGTTCCCGG TTTCGACGAG
GGGGCACACG CCACCGCACT CGGCAAGGCA CTGCTTGCGA CGCTCACGAC CGAGCAGCGG
TTCCGCTACC TGCGGGAGTA CGGCATGCGC CCGTTCACCA CCGGGACGCT GACCACCGTC
GAGGCGTTCG AGGCCGACCT TGCGGCCGGG GAGCGGCGGG GGATGCAGAT GGAACTGGGG
CAGTACCGGC ACGGAGTGGC CTGCGCGGCG GTGTTGGTGA GCTCCGACAA GGACATCGAG
CGGCGGATGG CGCTCGCCTG CGCGTTGCCG GCCAGCGAGA TGATGACCTC GGCACGGGTC
GTCCGGGCGA AGCTGCTCGC CGCAGCCCGC GGCATCGCCG ACTGCCTTGC CCACGACGCC
TGA
 
Protein sequence
MRDPLAEPSD LIRSVSRALR VLESVGRAPK GLTVKQIARR CELTVATTYH LVRTLAYEGY 
VIRREDGTYI VGLEVADRYR ELVAAFRGPP AVGESLRRAV LDTGYSHFLG KFIGGQVAIT
AVTEGPRSPY LEDLVPGFDE GAHATALGKA LLATLTTEQR FRYLREYGMR PFTTGTLTTV
EAFEADLAAG ERRGMQMELG QYRHGVACAA VLVSSDKDIE RRMALACALP ASEMMTSARV
VRAKLLAAAR GIADCLAHDA