Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_4448 |
Symbol | |
ID | 5704939 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 5025622 |
End bp | 5026404 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641273864 |
Product | IclR family transcriptional regulator |
Protein accession | YP_001539213 |
Protein GI | 159039960 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0345876 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGCGACC CCTTGGCGGA ACCTTCGGAC CTGATCCGGA GCGTGTCCCG CGCGCTACGA GTGCTTGAGT CGGTCGGCCG TGCTCCGAAA GGGCTGACCG TCAAACAGAT CGCGCGACGG TGTGAGCTGA CCGTGGCCAC CACCTACCAC CTCGTCCGCA CCCTGGCCTA CGAGGGCTAC GTGATCCGGC GCGAGGACGG TACCTACATC GTGGGCCTGG AGGTGGCCGA CCGCTACCGT GAGCTGGTCG CCGCCTTCCG CGGCCCACCG GCGGTCGGGG AGTCCCTCCG GCGTGCCGTC CTCGACACCG GCTACAGCCA CTTCCTGGGC AAGTTCATCG GTGGTCAGGT CGCCATCACG GCCGTCACCG AAGGTCCACG CTCACCGTAC CTGGAGGACC TGGTTCCCGG TTTCGACGAG GGGGCACACG CCACCGCACT CGGCAAGGCA CTGCTTGCGA CGCTCACGAC CGAGCAGCGG TTCCGCTACC TGCGGGAGTA CGGCATGCGC CCGTTCACCA CCGGGACGCT GACCACCGTC GAGGCGTTCG AGGCCGACCT TGCGGCCGGG GAGCGGCGGG GGATGCAGAT GGAACTGGGG CAGTACCGGC ACGGAGTGGC CTGCGCGGCG GTGTTGGTGA GCTCCGACAA GGACATCGAG CGGCGGATGG CGCTCGCCTG CGCGTTGCCG GCCAGCGAGA TGATGACCTC GGCACGGGTC GTCCGGGCGA AGCTGCTCGC CGCAGCCCGC GGCATCGCCG ACTGCCTTGC CCACGACGCC TGA
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Protein sequence | MRDPLAEPSD LIRSVSRALR VLESVGRAPK GLTVKQIARR CELTVATTYH LVRTLAYEGY VIRREDGTYI VGLEVADRYR ELVAAFRGPP AVGESLRRAV LDTGYSHFLG KFIGGQVAIT AVTEGPRSPY LEDLVPGFDE GAHATALGKA LLATLTTEQR FRYLREYGMR PFTTGTLTTV EAFEADLAAG ERRGMQMELG QYRHGVACAA VLVSSDKDIE RRMALACALP ASEMMTSARV VRAKLLAAAR GIADCLAHDA
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