| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_4445 |
|---|
| Symbol | |
|---|
| ID | 5705923 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | - |
|---|
| Start bp | 5021906 |
|---|
| End bp | 5022598 |
|---|
| Gene Length | 693 bp |
|---|
| Protein Length | 230 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 641273861 |
|---|
| Product | putative transmembrane anti-sigma factor |
|---|
| Protein accession | YP_001539210 |
|---|
| Protein GI | 159039957 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0140541 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCGGT GCGAGTTCGC GCACGACGAC GGCGCGTACG TGCTGGGTGC GCTGGCCCCG
GCGCAGCGGG CGGCGTACGA GCGGCACCTT GCCGGCTGCA CCGAGTGCGG GCATGCGGTC
GCGGAGATCG CTGTGCTGCC CGGGCTGCTC GGCCGGCTCG ACCCCGCAGA CCTGGATCGA
TTCGTGCCGC CGCCGGCGGA CTCCCGGCTG TCTGGCCTGC TCGCCGCCGC GGGTGAGCAC
CGGCACCGTG AACGCCGCGC CACCCGCCGT CGGTACGCCC GCACCACCCT CGCCGCGGCC
GCGGTGGCGC TGGTTGTCGG TCTCGGTACG GCCGCCGTGT GGCCCGAACA GCCGACCACC
GACCCGGCAG GTGGTGTGGA GATGGTCGCG ATGCGGCCGG TCGCCGGGGC GGTTCCGGTG
TACGCCGAGA TCGGCCTCGT CGGTACCGCC TGGGGCACCA GGGTGGCCAT GCGCTGCGGC
TACAACGCCG GCACGGGGTA CGACGGGGCG CGCCCGTTCC GGCTGGTCGC GCACGGCCCG
GACGGGGCGA CCGAGCAACT CGGCTCGTGG CTCGCCGCCC CCGGCGACGA CCTGCGGATC
AGCGGTGCCA CCCGGTTCAC CGACGCCGAA CTGGTCCGGC TGGAACTGGT CCGGCTCGAC
GGCACCACGA TCCTGGCCTA CGACGTCCCC TGA
|
|---|
| Protein sequence | MTRCEFAHDD GAYVLGALAP AQRAAYERHL AGCTECGHAV AEIAVLPGLL GRLDPADLDR
FVPPPADSRL SGLLAAAGEH RHRERRATRR RYARTTLAAA AVALVVGLGT AAVWPEQPTT
DPAGGVEMVA MRPVAGAVPV YAEIGLVGTA WGTRVAMRCG YNAGTGYDGA RPFRLVAHGP
DGATEQLGSW LAAPGDDLRI SGATRFTDAE LVRLELVRLD GTTILAYDVP
|
|---|
| |