Gene Sare_4425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_4425 
Symbol 
ID5703938 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp4999483 
End bp4999887 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content68% 
IMG OID641273844 
ProductPilT domain-containing protein 
Protein accessionYP_001539193 
Protein GI159039940 
COG category[R] General function prediction only 
COG ID[COG1487] Predicted nucleic acid-binding protein, contains PIN domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00042868 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAGCCTGG TCGTTCTGGA CACCGACGTC GCGTCGGCGA TCCTGCGGGG CCGACTGCAT 
GACCGGCTTC GTGCCCGGCT GGCCGGTAAG ACCCTGTGCA TCACGTTCGT CACGCTCGCA
GAGTTGACCA AGTGGACCGT GCTGCGGAGC TGGGGGCCGC GCAAACTCGC TGATCTGGCG
CAGTGGCGAT CCGGGGTCGT GCTGCTGCCC TTCGATGAGG CGGTGGCGAC CACCTGGGGT
CAGCTTCAGG CGCGGGCGCA GCATCGGGGG CGTCCCCGTC CGACGAACGA CTCCTGGATC
GCGGCCTGCT GCCTGGTCGA CCGGCTGCCG CTGGCGACCT TCAACGGCAA GGACTACGCC
GACTTCGCCG AGTACGACGG CCTACGTCTG TTCGACGTCT CGTAG
 
Protein sequence
MSLVVLDTDV ASAILRGRLH DRLRARLAGK TLCITFVTLA ELTKWTVLRS WGPRKLADLA 
QWRSGVVLLP FDEAVATTWG QLQARAQHRG RPRPTNDSWI AACCLVDRLP LATFNGKDYA
DFAEYDGLRL FDVS