| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_4419 |
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| Symbol | |
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| ID | 5705521 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | - |
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| Start bp | 4993711 |
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| End bp | 4994478 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641273838 |
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| Product | type II secretion system protein |
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| Protein accession | YP_001539187 |
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| Protein GI | 159039934 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4965] Flp pilus assembly protein TadB |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.219258 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00591921 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCCCAT CGGTGTTGAC CGGCGGGCGT CGCTTCGTGC CGGCCCTGCT GGAGATCCTC
GAGTGGACGA GGCGCCGTCC GGTCCGTCGG CTGCGCACTC TTGATCGTGT TCCGCCCGTA
CCGTTGGTGA GCAGGCCAGG CAGCGAGGGT GACACCCGCA CGGGATCCCG CTACCGGCTG
GACCCGATTC GGCTCGTCGC CGCGCTCGTC GCCGTCGCCG TCGCTTCGCT GGTGGGCGGA
TGGCCTGGCC TGGTTGGTGC TCCGGTTGCC GCGGTGCTAC TCGACCGTCT GCTGCGTCGG
GTCGAGCCAC CGGCCGTCCG CGAGCGGCGT CGGCGAGAGG CCGCGTCCCT GCCGCTGGCC
GCTGATCTGC TCGCGTCGGT GATGCGCGCG GGCGCCCCCG TCGACCGGTC GGTGCTGGCG
GTGGCGGAGG CCCTCGACGG GCCCCTCGCG GAGCGGCTCG CGCTGGTTGG TCGCCTTCTT
CGCCTCGGAG CGGAGCCGGC GGAGGCGTGG TCGACGCTTG CGGCGGTGCC TGGTGCCGAG
CGCCTGATCG CGGCCGCGCT CCGCTCGGCG GCGAGTGGGG CCACGCTGGC GGGCGCGTTG
ACGCGTCTCG CCGACGATCT TCGAGCCGAT CGGGCCACGG AAGTCGAGGC GAAGGCCCGC
CGGTCCGGGG TGCTGATCGT GTTGCCGTTG GGGCTCTGCT TCCTACCGGC CTTCATACTC
GCCGGCCTGA TGCCGGTGAT CGTCGCCGTC CTCGGTGACG TGCTCTGA
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| Protein sequence | MTPSVLTGGR RFVPALLEIL EWTRRRPVRR LRTLDRVPPV PLVSRPGSEG DTRTGSRYRL
DPIRLVAALV AVAVASLVGG WPGLVGAPVA AVLLDRLLRR VEPPAVRERR RREAASLPLA
ADLLASVMRA GAPVDRSVLA VAEALDGPLA ERLALVGRLL RLGAEPAEAW STLAAVPGAE
RLIAAALRSA ASGATLAGAL TRLADDLRAD RATEVEAKAR RSGVLIVLPL GLCFLPAFIL
AGLMPVIVAV LGDVL
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