Gene Sare_4406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_4406 
Symbol 
ID5703455 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand- 
Start bp4979227 
End bp4979898 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content68% 
IMG OID641273825 
ProductTetR family transcriptional regulator 
Protein accessionYP_001539174 
Protein GI159039921 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.732992 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones8 
Fosmid unclonability p-value0.0232179 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCACAC CAGCCGCCAC GACCGGGCCG CTGCGCCGCG TACCGGTGCA GGGTCGAAGT 
GTCGCTCGGG TCCAGCGGAT GCTGGACGCC TGTGCGGAGC TCGTCGACGA GGTGGGGTAC 
GAGGGGCTGA CCACGACGCT GCTCGCCGAG CGCGCCGAGG TGGCGATCGG GTCGGTCTAC 
CAGTTCTTCC CGGACAAGCG GGCGATCGTG CAGGCGTTGA CCCTGCGCAC GATGGAGTCG 
TATCTCCAGC GGCTCGACGA GAGGTTCGCC TCCGACGACC TGACCCACTG GTGGGACGGG 
GTCGACGCGG CAATCGACGA GTACATCACG ATGCACCGCA CCGTTCCCGG GTTCCGTACC 
CTGCACTTCG GCGACGTGGT CGACCTGCAC CTGCTCGATG AGCAGCGGGA CAACAACGGG 
GTGATCGCGG ACCAACTGGC CCGCGTCCTC ACCGAACGCT TCGGACTCAC CGACGTCCCC 
GAGCTCCAGT TCTATCTCGA GATCGCAGTC GAGGGCGCCG ACGCGCTCAT CAAACTGGCG 
TTCCGCCGTC AACAAGAGGG TGACGACCGG GTGCTCGTCG AAGCGAAGGC CCTGATCCGG 
GAGTACCTGT ACCGGCAGGT CGACGCTCGT CAGGGCGTGG ACCTGCCGGT GGAGGTGGCC 
CAGCCGGCCT GA
 
Protein sequence
MSTPAATTGP LRRVPVQGRS VARVQRMLDA CAELVDEVGY EGLTTTLLAE RAEVAIGSVY 
QFFPDKRAIV QALTLRTMES YLQRLDERFA SDDLTHWWDG VDAAIDEYIT MHRTVPGFRT 
LHFGDVVDLH LLDEQRDNNG VIADQLARVL TERFGLTDVP ELQFYLEIAV EGADALIKLA 
FRRQQEGDDR VLVEAKALIR EYLYRQVDAR QGVDLPVEVA QPA