| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_4362 |
|---|
| Symbol | |
|---|
| ID | 5706443 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | - |
|---|
| Start bp | 4929217 |
|---|
| End bp | 4930323 |
|---|
| Gene Length | 1107 bp |
|---|
| Protein Length | 368 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 641273784 |
|---|
| Product | glycosyl transferase family protein |
|---|
| Protein accession | YP_001539134 |
|---|
| Protein GI | 159039881 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.03216 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCGCCC CGCACCTGCT CGGCCCGGTC GCCGAGCGCG TATCCGCGGT CGAACGGATC
GCCGTGCTGC GGGCCAACGC GCTCGGCGAC TTCATCTTCG TCCTGCCGAC GCTGGAGGCG
CTGCGGGCCG CGTACCCCGC CGCGGAGATC GTCCTGCTGG GCGCACCGTG GCACGCGAAG
CTGTGGCGCG ACCGGCCGGG TCCGGTGGAC CGGGTCCTGG TGGTCCCGCC GGCTCCCGGA
ATCCGTCGCC CGGAGCCGGA CGAGCCGGAG TCCGAGTTGG CGGACTTCCT CGCCCGCGCC
CGCAGGGAAC GCTTCGATCT GGCGCTGCAG GTGCACGGCG GTGGGGCCAA CTCCAATCCG
GTCGTGGCCG GCCTCGGCGC CCGGGTCACG GCCGGCCTGC GGGCCGAGGA CGCGCCGCCG
CTGGACCGCT GGCTGCGGTA CGTCTACTAC CAGCACGAGG TGATCCGTTA CCTGGAGGTG
GCGGCCCTGG TGGGCGCTCC GGCGACCACC GTCACTCCCG CCCTGGCGGT TACCGACGCC
GACCGGGCCG AGGCGGCCGA GGTGCTCGGC CCGGCGGACC GGCCCCGGGT GGCCTTGCAT
CCGGGCGCCA CCGACACCCG CCGGCGGTGG CCGGTCGAAC GCTTCGCGGC GGTCGCTCGG
GAACTGCACG GGGACGGGTA CGAGGTGCTG GTCACCGGCA CCCCGGTCGA ACAGAACGAG
GTGGACCGTC TGGTGGCGGC GGCCGGGGTG CCCCTCCGGC CGCAGGTCGG CACGCTCAGC
CTCGGCGGGC TGGCCGGCTG CTACGCCGGC TGCGCGGTGG TGGTCGCCAA CGACACCGGG
CCGCTGCACC TGGCGGCGGC GGTCGGCACC CCCACGGTCG GCGTCTACTG GGTCGGCAAT
TTCATCACCA CGGCGAGCCC GCTGCGCGGC CGGCACCGCC CGATCTGTTC CTGGACGGTG
CTCTGCCCGG TTTGTGGGGT CGACTGCACC CCGGGTAGCT ACCCGCACCG GCCCGGCGAC
GGCGAGTGCC CGCACCGCGA CTCGTTCGTG GCCGACGTCC CGGTGATCGA GGTCCTCGAA
GCCACCCGCG ATCTGCTCGG CGGGTAG
|
|---|
| Protein sequence | MVAPHLLGPV AERVSAVERI AVLRANALGD FIFVLPTLEA LRAAYPAAEI VLLGAPWHAK
LWRDRPGPVD RVLVVPPAPG IRRPEPDEPE SELADFLARA RRERFDLALQ VHGGGANSNP
VVAGLGARVT AGLRAEDAPP LDRWLRYVYY QHEVIRYLEV AALVGAPATT VTPALAVTDA
DRAEAAEVLG PADRPRVALH PGATDTRRRW PVERFAAVAR ELHGDGYEVL VTGTPVEQNE
VDRLVAAAGV PLRPQVGTLS LGGLAGCYAG CAVVVANDTG PLHLAAAVGT PTVGVYWVGN
FITTASPLRG RHRPICSWTV LCPVCGVDCT PGSYPHRPGD GECPHRDSFV ADVPVIEVLE
ATRDLLGG
|
|---|
| |