Gene Sare_4353 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_4353 
Symbol 
ID5708421 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp4919266 
End bp4920300 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content66% 
IMG OID641273775 
ProductKu family containing protein 
Protein accessionYP_001539125 
Protein GI159039872 
COG category[S] Function unknown 
COG ID[COG1273] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02772] Ku protein, prokaryotic 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.618075 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGGCCA TCTGGAAAGG AGCCGTGTCG TTTGGGCTCG TCTCGATCGG CGTGAAACTG 
TATTCGGCAA CCGAGGAGAA AGACATTCGG TTCCACCAGG TACACCGGGA CGATGGTGGC
CGGATCCGCT ACAAGCGCAC CTGCCAGGTC TGTGGCGAGG AGGTCAGCTA CGACGACATC
GCCAAGGGAT ACGACATCGG CGGCGGCGAG TTGGTCATCC TCACCGACGA CGACTTCGCG
GACCTGCCGC TGAACACCTC ACGGGCCATC GACGTGCTGG AGTTCGTCCC CGCCGAGCAG
GTCGACCCGA TCCTCTACAA CAAGTCGTAC TTTCTCGAAC CGGAGGGCAC CGCCACCAAA
CCCTACGTGT TGCTGCGCAA CGCGCTGACC GACTCCGAGC GCGTGGCCAT CGTCAAGGTG
GCGATCCGCC AACGCGAGCA ACTCGCGACG CTCCGGGTCC ACCAGGGGGT GCTGCTGCTC
AACACGATGT TGTGGCCCGA CGAGATCCGG AAGCCGGACT TCGGCTTCCT CGACGAGGAC
CTGAAGGTCC GGCCCCCGGA ACTGGCGATG GCCAGTTCCC TGATCGACTC GATGGCGGGT
GACTTCCAAC CGGACGTCTT CACCGACGAC TACCGGGCCG CCCTACAGGA AGTGATCGAC
GCGAAGGTGG AGGGCCGCGA GGTCGTGCAA CCGGAGGAGG CTGAAGAGGC TCCGGCGGCG
GCGGTAGACC TGATGGCGGC GCTGAAGGCA TCCGTGGAGC GGGCCCAGGC AGCGCGTGGC
GAGAAGCCCG CCGGCCGGGG CGCGGGCGAA CCGACACCGA TCTCGGCGGC GCGTTCGGCG
CAGCGAAAAG CGGCCGAGCA GAAGGCCCCA CCCAAGAAAG CCGCTGGCAA GAGGAACGAC
AAGGGCGCGT CCGCGAAGAC GGCCGGGAAG AAGACAGCTG AGAAGAAAGC GGCGACCGGC
AAGAAGGCCG CGGGGCAGAA GGCGGAGCCG GCCAAGAAGG CGGCCGCCAA GAAGACCACC
CGCAAAACGG CCTGA
 
Protein sequence
MRAIWKGAVS FGLVSIGVKL YSATEEKDIR FHQVHRDDGG RIRYKRTCQV CGEEVSYDDI 
AKGYDIGGGE LVILTDDDFA DLPLNTSRAI DVLEFVPAEQ VDPILYNKSY FLEPEGTATK
PYVLLRNALT DSERVAIVKV AIRQREQLAT LRVHQGVLLL NTMLWPDEIR KPDFGFLDED
LKVRPPELAM ASSLIDSMAG DFQPDVFTDD YRAALQEVID AKVEGREVVQ PEEAEEAPAA
AVDLMAALKA SVERAQAARG EKPAGRGAGE PTPISAARSA QRKAAEQKAP PKKAAGKRND
KGASAKTAGK KTAEKKAATG KKAAGQKAEP AKKAAAKKTT RKTA