| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_4352 |
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| Symbol | |
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| ID | 5708420 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | - |
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| Start bp | 4918239 |
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| End bp | 4919180 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641273774 |
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| Product | DNA polymerase LigD ligase region |
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| Protein accession | YP_001539124 |
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| Protein GI | 159039871 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1793] ATP-dependent DNA ligase |
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| TIGRFAM ID | [TIGR02779] DNA polymerase LigD, ligase domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCCGGCG TGCCGCCCAA GCCGATGCTC GCGATGACCG GGGAGTTGCC GGCGGGTGCC
GGCTGGGCGT ACGAGTTCAA GTGGGACGGG ATACGCGCCC TGGCTGACCT CTCCGGCGGC
CGACGACACG TGTACGCCCG TTCCGGCGTC GAGGTCACCG TCGCCTACCC GGAACTGGCG
GGCCTGCCCG CGCAGGTGGA CAACGCACTC CTTGATGGCG AGGTGGTGCT TTTTGGTGCC
GCTGGACAGC CGTCGTTCAC GGCGCTCGCC GAGCGGATGC ACGTCCGGGA GTCGGGTCGG
GCCGCGAGGC TGGCGGCGAC GCTGCCCGTC ACGTACCTGA TCTTCGACCT GCTACGCCTC
GATGGCGTCG ACCTGACCGG CCACTCGTGG CAACAACGGC GGGCCGCCCT GGACGGGTTG
GGGCTGGCCG GCCCACGATG GGCGGTTCCC CCGGTCTTCT GGGACGGCCC GGCCACCTAC
CAGGCGGCGG GGGAGCACGG TCTGGAGGGG GTGATGGCCA AGCGGGTCGG TTCGATCTAT
CGGCCGGGTA CCCGGTCGCC GGACTGGGTC AAGGTCAAGT TGGAGGTGAC CGGCGACTTC
GTCGTGGGTG GCTGGCGGCC GGGAGCGCGC CGGCTTGGCG GACTGTTGGT CGGGGTGCCC
CGGCCCGACG GCCGACTCAC GTTCCGGGGG CGGGTCGGCG GTGGCATCGG CGCGGCGTTG
GAGCGGGAAC TGCTGCGCGA GTTGGAACCG CTGCGTGCGG CCGGTTCGCC CTTCGCCGGG
GACCTGCCCC GCGAGGACGC CCGGACCGCG GTCTGGGTGT CACCCCGGGT CGTGGTGGAG
GTCAAGTACG GCCAGCTCAC CCCGGACGGG CGACTGCGTT TCCCGCGGGT GCTGCGGTTA
CGTCCGGACA AACCCGCCGA GGAGGTCGAC GATGCCGGCT GA
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| Protein sequence | MPGVPPKPML AMTGELPAGA GWAYEFKWDG IRALADLSGG RRHVYARSGV EVTVAYPELA
GLPAQVDNAL LDGEVVLFGA AGQPSFTALA ERMHVRESGR AARLAATLPV TYLIFDLLRL
DGVDLTGHSW QQRRAALDGL GLAGPRWAVP PVFWDGPATY QAAGEHGLEG VMAKRVGSIY
RPGTRSPDWV KVKLEVTGDF VVGGWRPGAR RLGGLLVGVP RPDGRLTFRG RVGGGIGAAL
ERELLRELEP LRAAGSPFAG DLPREDARTA VWVSPRVVVE VKYGQLTPDG RLRFPRVLRL
RPDKPAEEVD DAG
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