| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_4342 |
|---|
| Symbol | |
|---|
| ID | 5708410 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | - |
|---|
| Start bp | 4909867 |
|---|
| End bp | 4911129 |
|---|
| Gene Length | 1263 bp |
|---|
| Protein Length | 420 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641273764 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001539114 |
|---|
| Protein GI | 159039861 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0527256 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGTTG TTCAGTCCTG CGCGAGATGC CGGACCGTGC TCATTCCCGG CCAGCAGGGG
TGCGTGCGAT GTGGCCTCAC GGCCGCCGAG CCGACACGGG AGTGCCCCGC CTGTCAACGT
CCCACCGCCG TGGATGCGCA GTACTGCCCT GCCTGCGGAG AACAGCTGAG GCAATCGTCA
CCGATGCTCG CCGCCGACCT GGCTACGGCA CCGGCGCCGG GCACTGACCC GTCCGCCCCA
TTGACGGCAG CGCCCGCCGT GTTCGCCACA GTGCGCAAAC CCCGTCGCTG GGTATATCTG
CTCACCGGCG TCGCACTGGC AGTGCTGCTG ACCGGCATCA CGGGCCTCTA CGCGGTGCAG
AGCATCGTCT ACACCCCCGA GCGTGTGGTG ACGGGCTACT TTGCCGCACT GTCCGAACGG
GACGCCGCGG CGGCGCTGTC ATTCCTTGAG GAGCCGCGCA GCGAGATCCC GAATCGCCCC
TTGGAACTGC CGATGGTCCC GTTGACCACG TCCTATCAGC CGCCATCGGG GGCAAAGGTC
ACGTCGATCG GGGGCCTGAG CGAGGCCGAG TTAGAGGGCA GCCCGCCTGC GGAGAACAGT
GATGACTGGC GTTCGGCGAG GGTTACGTAC AGGGTCGGCG ACCGTACCTA TCGGGACGTG
CTCTATCTGC ACCGGCAGGA ACGGAAAGAG TTAGGCCTCT TCCGTGACTG GCTGATCTAC
GGCGGGGTGA ATCAGCTGGC CGTACGCAAT CGGCCGGACA GTCCTGGCGT GCTTATCAAC
GGGCAGGCGG TACCGACCCG CGAGGGGTAC GCGCGGGCAC GCGCCTTTCC CGGTATCCAC
GAGGTGCGGC TGGCCGACGA CCCGTTGGTC GAGGTGGAGC CGGTGGTTCT GGAGGTTGGC
CTGGTACGGC CCGACAATGT ACTGCTCAAG CCGATTCTCA GGGAATCCGC GCGCAGCGAG
GTCGAGAGTC AGGTGAAGGC GTACCTGGAC GAGTGTGCCG AGAGCAGCGA CATGTCGCCG
AAAGGCTGCC CCTTCTCCGG TCCTCCGTTC GGGACCGCGA CGAACGTCAG GTGGACGATC
GACGCGTACC CGAAGCTTGA CATCCGGGCG ATCGACGGTG AGCTCACCGT CAGGGGCTGG
TCGGGACGTG CCTCCGTGAC GTGGACTGGT TCCGGCGGCA GGACGCACGA ATACGACAAC
CCCTTCGTTG TCACCGGTCG GGCCACAGTG ATCGACGGTA GGGTGACGTT CCTCAGCGAC
TGA
|
|---|
| Protein sequence | MTVVQSCARC RTVLIPGQQG CVRCGLTAAE PTRECPACQR PTAVDAQYCP ACGEQLRQSS
PMLAADLATA PAPGTDPSAP LTAAPAVFAT VRKPRRWVYL LTGVALAVLL TGITGLYAVQ
SIVYTPERVV TGYFAALSER DAAAALSFLE EPRSEIPNRP LELPMVPLTT SYQPPSGAKV
TSIGGLSEAE LEGSPPAENS DDWRSARVTY RVGDRTYRDV LYLHRQERKE LGLFRDWLIY
GGVNQLAVRN RPDSPGVLIN GQAVPTREGY ARARAFPGIH EVRLADDPLV EVEPVVLEVG
LVRPDNVLLK PILRESARSE VESQVKAYLD ECAESSDMSP KGCPFSGPPF GTATNVRWTI
DAYPKLDIRA IDGELTVRGW SGRASVTWTG SGGRTHEYDN PFVVTGRATV IDGRVTFLSD
|
|---|
| |