Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_4338 |
Symbol | |
ID | 5706614 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 4904175 |
End bp | 4904561 |
Gene Length | 387 bp |
Protein Length | 128 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641273760 |
Product | cold-shock DNA-binding domain-containing protein |
Protein accession | YP_001539110 |
Protein GI | 159039857 |
COG category | [K] Transcription |
COG ID | [COG1278] Cold shock proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCGACGG GTCGAGTGAA GTGGTACGAC GCGACCAAGG GATATGGATT CGTCACCAGT GACGAGGGGG GCGACGTGTT CCTGCCCAAG GCTGCGCTAC CGGCGGGTGT CACCGATCTC AAGGGCGGGC AGCGGGTCGA TTTCAGCGTG GTCGACAGCC GTCGTGGCGC CCAGGCGATG GGGGTCAAGC TGTTGGAGGC CCCGCCGTCC GTGGCGGAGC TGCGTCGCCG GCCCGCGGAG GAACTGCACG GCCTCGTCGA GGATATGATC AAGGTGCTGG AGGCGAAGGT GCAGCCGAAC CTACGTCGAG GCCGTTTCCC GGACCGGAAG ACCGCGCAGA AGATCGCTCA GCTGGTCCAC GCCGTCGCCC GTGAGCTGGA GGTCTGA
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Protein sequence | MPTGRVKWYD ATKGYGFVTS DEGGDVFLPK AALPAGVTDL KGGQRVDFSV VDSRRGAQAM GVKLLEAPPS VAELRRRPAE ELHGLVEDMI KVLEAKVQPN LRRGRFPDRK TAQKIAQLVH AVARELEV
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