Gene Sare_4338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_4338 
Symbol 
ID5706614 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp4904175 
End bp4904561 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content67% 
IMG OID641273760 
Productcold-shock DNA-binding domain-containing protein 
Protein accessionYP_001539110 
Protein GI159039857 
COG category[K] Transcription 
COG ID[COG1278] Cold shock proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGACGG GTCGAGTGAA GTGGTACGAC GCGACCAAGG GATATGGATT CGTCACCAGT 
GACGAGGGGG GCGACGTGTT CCTGCCCAAG GCTGCGCTAC CGGCGGGTGT CACCGATCTC
AAGGGCGGGC AGCGGGTCGA TTTCAGCGTG GTCGACAGCC GTCGTGGCGC CCAGGCGATG
GGGGTCAAGC TGTTGGAGGC CCCGCCGTCC GTGGCGGAGC TGCGTCGCCG GCCCGCGGAG
GAACTGCACG GCCTCGTCGA GGATATGATC AAGGTGCTGG AGGCGAAGGT GCAGCCGAAC
CTACGTCGAG GCCGTTTCCC GGACCGGAAG ACCGCGCAGA AGATCGCTCA GCTGGTCCAC
GCCGTCGCCC GTGAGCTGGA GGTCTGA
 
Protein sequence
MPTGRVKWYD ATKGYGFVTS DEGGDVFLPK AALPAGVTDL KGGQRVDFSV VDSRRGAQAM 
GVKLLEAPPS VAELRRRPAE ELHGLVEDMI KVLEAKVQPN LRRGRFPDRK TAQKIAQLVH
AVARELEV