| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_4310 |
|---|
| Symbol | rplV |
|---|
| ID | 5705104 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | - |
|---|
| Start bp | 4875479 |
|---|
| End bp | 4875937 |
|---|
| Gene Length | 459 bp |
|---|
| Protein Length | 152 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641273729 |
|---|
| Product | 50S ribosomal protein L22 |
|---|
| Protein accession | YP_001539082 |
|---|
| Protein GI | 159039829 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0091] Ribosomal protein L22 |
|---|
| TIGRFAM ID | [TIGR01044] ribosomal protein L22, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.620955 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0104158 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCAGGAA AGGGCGACGC TCCGGTGCTC CCGGGCGCGC GGGCGGTTGC GCGGTACGTG
CGCATCTCGC CGATGAAGGC GCGCCGGGTG GTCAACCTCG TCCGCGGCCT GCCCGCGAAG
GAGGCGCTCA CGGTGCTGCA GTTCGCGCCA CAGGCCGCGA GCGAGCAGGT GTACAAGGTA
CTCGCGAGCG CGATCGCCAA CGCGGAGAAC AACGAGCGGC TGGACCCCGA CGCGCTGCTC
GTCAGCGAGG CGTACGTGGA CGAGGGCCCG ACGATGAAGC GGTTCCAGCC GCGCGCCCAG
GGGCGGGCGT ACCGGATCCG GAAGCGTACG TGTCACATCA CGGTGGTGGT TGAGGCGGTG
GCGCCGGCCG CGCCGACGAA GGCGGCGTCG AAGAAGGCGG CTCCGGCCAA GCAGACCACG
CCAGCTGCGA CCGAGAGCAA GACGGAGGGT GCCGAGTAA
|
|---|
| Protein sequence | MPGKGDAPVL PGARAVARYV RISPMKARRV VNLVRGLPAK EALTVLQFAP QAASEQVYKV
LASAIANAEN NERLDPDALL VSEAYVDEGP TMKRFQPRAQ GRAYRIRKRT CHITVVVEAV
APAAPTKAAS KKAAPAKQTT PAATESKTEG AE
|
|---|
| |