| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_4308 |
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| Symbol | rplP |
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| ID | 5705102 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | - |
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| Start bp | 4874184 |
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| End bp | 4874609 |
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| Gene Length | 426 bp |
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| Protein Length | 141 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641273727 |
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| Product | 50S ribosomal protein L16 |
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| Protein accession | YP_001539080 |
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| Protein GI | 159039827 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0197] Ribosomal protein L16/L10E |
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| TIGRFAM ID | [TIGR01164] ribosomal protein L16, bacterial/organelle |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.158733 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00350753 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGCTGATGC CGCGCAAGCC CCCGAAGGGC TTCCGCAAGC CGCACCACCC GGACCGCAGT
GGCGCGTCCA AGGGCGGTAA CCGGGTGGTG TTCGGCGAGT TCGGGATCCA GGCTCTCGAA
CCGGCCTATG TGACCAACCG CCAGATCGAG TCGGCGCGTA TCGCGATGAC CCGGCACATC
AAGCGTGGTG GCAAGGTCTG GATCACGATC TTCCCGGACC AGGCCCTCAC CAAGAAGCCG
GCCGAGACCC GGATGGGTTC CGGTAAGGGC TCGCCGGAGT GGTGGGTCGC GAACGTGAAA
CCGGGGCGGG TTCTTTTCGA GATGTCCTTC CCCAACGAGC AGATCGCGCG TGAGGCGATG
CGTCGCGCGA TCCACAAGCT CCCGATGAAG TGCCGGATTG TTACGCGCGA AGTGGGTGAA
TCCTGA
|
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| Protein sequence | MLMPRKPPKG FRKPHHPDRS GASKGGNRVV FGEFGIQALE PAYVTNRQIE SARIAMTRHI
KRGGKVWITI FPDQALTKKP AETRMGSGKG SPEWWVANVK PGRVLFEMSF PNEQIAREAM
RRAIHKLPMK CRIVTREVGE S
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