| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_4289 |
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| Symbol | rpsM |
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| ID | 5704892 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | - |
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| Start bp | 4863634 |
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| End bp | 4864014 |
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| Gene Length | 381 bp |
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| Protein Length | 126 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641273708 |
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| Product | 30S ribosomal protein S13 |
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| Protein accession | YP_001539061 |
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| Protein GI | 159039808 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0099] Ribosomal protein S13 |
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| TIGRFAM ID | [TIGR03631] 30S ribosomal protein S13 |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.532691 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0012872 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGCACGTC TAGTCGGCGT GGATCTCCCC CGCGAGAAGC GGTTGGAGAT CGCGCTCACC
TACATCTTCG GCGTGGGTCG CACCCGCGCC CTGGAGACGC TCGCCGCTAC CGGCATCTCG
CCGGACAAGC GCGCCCGGGA CCTCACGGAC GAGGAGCTCG TGCAGCTCCG CAACCACATC
GAGGCCAACT ACAAGGTCGA GGGTGACCTG CGCCGCGAGG TCGCCGCGGA CATCCGTCGC
AAGGTCGAGA TCGGCTGCTA CGCCGGCATC CGGCACCGCC GGGGCCTGCC GGTTCGTGGC
CAGCGGACGC GGACCAACGC CCGCAGCCGC AAGGGCCCGA AGCGGACCGT CGCCGGCAAG
AAGAAGCCCG GCAGGAAGTA A
|
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| Protein sequence | MARLVGVDLP REKRLEIALT YIFGVGRTRA LETLAATGIS PDKRARDLTD EELVQLRNHI
EANYKVEGDL RREVAADIRR KVEIGCYAGI RHRRGLPVRG QRTRTNARSR KGPKRTVAGK
KKPGRK
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