| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_4285 |
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| Symbol | rplQ |
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| ID | 5706997 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | - |
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| Start bp | 4860846 |
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| End bp | 4861418 |
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| Gene Length | 573 bp |
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| Protein Length | 190 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641273704 |
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| Product | 50S ribosomal protein L17 |
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| Protein accession | YP_001539057 |
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| Protein GI | 159039804 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0203] Ribosomal protein L17 |
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| TIGRFAM ID | [TIGR00059] ribosomal protein L17 |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.106968 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00521298 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGCCCACGC CCACCAAGGG TGCCCGCCTC GGCGGCAGCC CGGCGCACGA GCGGTTGATG
CTGGCCAACC TGGCCACGTC GCTGTTCCAG CACGGCAAGA TTCAGACCAC CGAGACCAAG
GCCCGGCGGC TGCGCCCGCT CGCGGAGCAG CTGATCACCA AGGCCAAGCG TGGTGACCTG
GCCTCCCGGC GTCGGGTGCT CGCGGTCGTC AAGGACAAGG ACGTGGTCTA CACCCTGTTC
GACCAGATCG CGCCCCGGTA CGCCAACCGT AACGGTGGCT ACACCCGGAT CGTGAAGACC
GGTCCGCGCA AGGGTGACGC CGCTCCGATG GCGATCATCG AGCTGGTCGA GGAACTGGCG
GACGCGCAGC CGAAGGCGAA CAAGAAGACC GCTGCCCGCA AGGCTGCTCA GCAGGACAAG
GTCGAGGCGC TCGCCCCGGC CGACGAGGCC CCGGCACCAA CCGGCGGCGA CCAGGACGCC
GAGGCGCCGG TGTCGGTGTC GGGTGACACC ACCGCGGCTC GCGCGGACAG TGACCTCGCC
ATCGAGGAGA ACAACGAGCA GAACAAGGCC TGA
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| Protein sequence | MPTPTKGARL GGSPAHERLM LANLATSLFQ HGKIQTTETK ARRLRPLAEQ LITKAKRGDL
ASRRRVLAVV KDKDVVYTLF DQIAPRYANR NGGYTRIVKT GPRKGDAAPM AIIELVEELA
DAQPKANKKT AARKAAQQDK VEALAPADEA PAPTGGDQDA EAPVSVSGDT TAARADSDLA
IEENNEQNKA
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