| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_4284 |
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| Symbol | |
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| ID | 5706996 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | - |
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| Start bp | 4859946 |
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| End bp | 4860776 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641273703 |
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| Product | tRNA pseudouridine synthase A |
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| Protein accession | YP_001539056 |
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| Protein GI | 159039803 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.143987 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00623467 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGCAGGAGC GCACCCGGGT ACGGCTGGAC GTCTCATACG ACGGCACCGA CTTCTCCGGC
TGGGCGGTTC AGCCGGACCG GCGTACGGTC GCCGGGGTCC TCGTGCAGGC GTTCGATCTG
GTGCTCGGCT CCGACGCGGC GACCGGCCTG ACCGTGGCCG GCCGAACCGA CGCGGGCGTG
CACGCCACCG GGCAGGTCTG CCACGTCGAC CTGCTGACCG AGGTGTGGCG GCGGCACGAG
GGCACGCTGC TGCGGCGGCT GGCCCGGCTG CTCCCCGGCG ACGTACGGGT GCGGGCGGTG
ACCGGGGTGC CGGGCGACTT CGACGCCCGC TTCTCGGCGA CCTTCCGGCG GTACGAGTAC
CGGGTGACCG ATGCGCCCTG GGGCGCCGAG CCGTTGCGTC GCCACGACAC CCTGGCCTGG
TCGAGCCGGC TCGACCAGGA CGCGTTGAAC GCCGCCGCCG ACGGGCTGGT GGGGGAGCAC
GACTTCGCCG CGTACTGCCG GCGAAAGGAG AACGCGACGA CGTTGCGGGA GGTGACCCGG
CTGGACTGGC GGCGTTCCGC GGACGGGGTG CTCGTGGCGA CCGTGCAGGC CGACGCCTTC
TGCCAGGCGA TGGTGCGCAG CCTGGTCGGT GCGATGCTGG TCGTGGGGGA CGGCCGCCGA
CCAGCCGGCT GGCCGGCCGG ACTGCTCGCC CGTCGCGAGC GCGCCAACGA GGTGAACGTC
GCCCCGGCGC ACGGCTTGAC CCTGGTCGCG GTGGGCTACC CGGACGACCC GGCCGGATAC
GCCGACCGGG CCACCCGGAC CCGCCGGTTG CGGGTGCCGC CGGATGCCTG A
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| Protein sequence | MQERTRVRLD VSYDGTDFSG WAVQPDRRTV AGVLVQAFDL VLGSDAATGL TVAGRTDAGV
HATGQVCHVD LLTEVWRRHE GTLLRRLARL LPGDVRVRAV TGVPGDFDAR FSATFRRYEY
RVTDAPWGAE PLRRHDTLAW SSRLDQDALN AAADGLVGEH DFAAYCRRKE NATTLREVTR
LDWRRSADGV LVATVQADAF CQAMVRSLVG AMLVVGDGRR PAGWPAGLLA RRERANEVNV
APAHGLTLVA VGYPDDPAGY ADRATRTRRL RVPPDA
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