Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_4283 |
Symbol | |
ID | 5706995 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 4859302 |
End bp | 4859907 |
Gene Length | 606 bp |
Protein Length | 201 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641273702 |
Product | methyltransferase small |
Protein accession | YP_001539055 |
Protein GI | 159039802 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2813] 16S RNA G1207 methylase RsmC |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.128853 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00530067 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGACCGGCG ACCACTACTT CACCGCTGAA CCTGCGACCG CCGCCCAGCC CCGGGAGGTG GTGTTCTCCG CCGCCGGACA TGACTACACC CTGGTCTCCT CCGGTGGCGT CTTCTCCGCT GGGCGGCTCG ACCCGGGAAC CGCGGTGCTG CTCCGCAAGG CCGACCTGCC GGCGCCCACC ACCACCGGTC AGCTACTCGA CCTTGGCTGC GGCTTCGGGC CGATCACCTG TGTGCTCGCC ACCTCAGCAC CGTCAGCCAC CGTCTGGGCC GTCGATGTCA ACGCGCGGGC CCGTGAGCTG ACCACGGTCA ACGCCGCGCG GGTTGGTGCG GCGGGCCGGG TACGTGTCGT CGAGCCGGAC GCGGTCGCGG CAGCGGTGAC ATTCGACCAG ATCTGGTCGA ACCCGCCGAT CCGGATCGGC AAGAACGAGC TGCACCAACT CCTGCTGCGC TGGTTGCCCC GGCTGGCGCC GGACGGGGTG GCCTGGCTGG TCGTCGCCCG TCACCTCGGC GGCGACTCGT TACACCGCTG GCTGGCCGAG CGGGGCTGGC AGGTCGCGCG GCCCGCGAGC CAGAAGGGCT ATCGGGTGCT GCGGGTAACC CGGTAA
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Protein sequence | MTGDHYFTAE PATAAQPREV VFSAAGHDYT LVSSGGVFSA GRLDPGTAVL LRKADLPAPT TTGQLLDLGC GFGPITCVLA TSAPSATVWA VDVNARAREL TTVNAARVGA AGRVRVVEPD AVAAAVTFDQ IWSNPPIRIG KNELHQLLLR WLPRLAPDGV AWLVVARHLG GDSLHRWLAE RGWQVARPAS QKGYRVLRVT R
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