| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_4246 |
|---|
| Symbol | |
|---|
| ID | 5708096 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | - |
|---|
| Start bp | 4818056 |
|---|
| End bp | 4819150 |
|---|
| Gene Length | 1095 bp |
|---|
| Protein Length | 364 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641273665 |
|---|
| Product | alpha/beta hydrolase fold |
|---|
| Protein accession | YP_001539018 |
|---|
| Protein GI | 159039765 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.146629 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.00549727 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGACCTCCG CACGCCTCCG GGTTCCGCTG CCCCGGACCC GCCACCCCCG GGCCGCGATC
GGGGCGTTGG CCGCCGTCGG TGTCGCGGCC GCCGGACTCG TCGCCGGCGT CGCGACCGAA
CGCGTGCTGA TCCGCCGGTT CAAAACCGAC CCCACTGACC GGTACGCCGG TGAGGCATTC
GGTGCACAGC GGTACGACGA GGCGTTACGG CTGGAAATGC CGGACGGCAC CGACATCCAC
GTGGAGGTGG TCGAACCGGT CCGGCCGGTC CCCGCGAACC CGACCATCGT GCTGGTGCAC
GGCTTCTGCC TGGACCTGGG GACCTTCCAC TTCCAGCGCA AGTTGCTCGC GGCGCGCGGC
GAGCACCGGA TCGTGGCGTA CGACCAGCCG GGGCACGGGC TCTCCGGTCA GTTGGCAACC
GGCGAGTACG ACCTGACCGT GCTCGGCCGG ACGCTCCGAG CGGTGATCGA CCGTACCGCG
CCGGAGGGTC CGCTGGTGCT GGTCGGCCAC TCGATGGGTG GCATGACCAT CATGGCGTTC
GCGGAACTCT TCCCGGAGTT GTTTGGGGAC CGGGTGGTGG GCACGGTGCT GATGGCCACC
TCGGGCGGGT TGCTCGCCGA GACCAAGCTG GTCGCCCCGG CGCTGCTCGG CCGGGTCGGT
GCGCCGGTGC TGCACATGAT GAGCAACGCC GCCCGCTACG GGGGCCCGGT GATCGACCGG
GCGCGCCGGT CCACCTCCAA CATGGCCTGG CTGCTCACCC GCAGGTACGG CTTCGGCACC
GACCAACCCA GCCCGGCTCT GGTCTCGTAT GTCGAGGAGA TGAACTCGCG GACCTCCGCC
GACACCGTCA CCCGTTACCT GCGCACGCTC GCCACCCACT CCCGGTTCCC GGCGCTGGCG
GCGTTGGCCG GCGCGCCGGT CCTGGTGCTG GTCGGGGAGA AAGACATGAT CACCCCGGTG
ACACACTCGG AGGAGATCAT CCGGCGGCTG CCGCACGCGG AATTCGTCAA GATCCCCGAC
AGTGGGCACG TGGTGATGTT GGAGCATGCC GATGAGGTGA ACGCGGCGCT GACCCGGTTC
CTGGAGGAGC TGTGA
|
|---|
| Protein sequence | MTSARLRVPL PRTRHPRAAI GALAAVGVAA AGLVAGVATE RVLIRRFKTD PTDRYAGEAF
GAQRYDEALR LEMPDGTDIH VEVVEPVRPV PANPTIVLVH GFCLDLGTFH FQRKLLAARG
EHRIVAYDQP GHGLSGQLAT GEYDLTVLGR TLRAVIDRTA PEGPLVLVGH SMGGMTIMAF
AELFPELFGD RVVGTVLMAT SGGLLAETKL VAPALLGRVG APVLHMMSNA ARYGGPVIDR
ARRSTSNMAW LLTRRYGFGT DQPSPALVSY VEEMNSRTSA DTVTRYLRTL ATHSRFPALA
ALAGAPVLVL VGEKDMITPV THSEEIIRRL PHAEFVKIPD SGHVVMLEHA DEVNAALTRF
LEEL
|
|---|
| |