Gene Sare_4244 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_4244 
Symbol 
ID5708094 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp4816667 
End bp4817365 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content69% 
IMG OID641273663 
Producturacil-DNA glycosylase 
Protein accessionYP_001539016 
Protein GI159039763 
COG category[L] Replication, recombination and repair 
COG ID[COG0692] Uracil DNA glycosylase 
TIGRFAM ID[TIGR00628] uracil-DNA glycosylase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.106427 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0153666 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGACG CACCCACCCT GGACCTGTTG GCTCTGCTCC CGCAGGAGTG GCGGTCCGCG 
CTCGCCCCGC ACCTCGACCC GGCCCGCACC GCTTCGCTCG CCGATTTCGT CGCCGAGGAG
TACGCCACAC GGACAGTGTT CCCGCCCGTG GAGGACCTCT TCTCGGCGTA CCGGCTCTGC
CCACCAGCGG ACTGCCGGGT GCTGATCCTC GGCCAGGATC CCTACCACCG GGCTGGGCAG
GCGCACGGGT TGAGCTTCAG CGTCCGCGAC GGTGTGGCGA TGCCGCCTTC ACTACGGAAC
GTGTTCAAGG AGTTGAGCGC TGACCTGGGC ATACCGAGGC CGACCAGTGG AAATCTGTGC
GGTTGGGCTG CGCAGGGTGT GCTGCTGCTC AACTCAGTGC TGACTGTCCG TGAGGGCAGC
CCCGGCTCGC ACGCCAACCG CGGCTGGGAG GAGTTCACCG ACGCGACGAT CCGGGTGCTG
GACGCGCTGG AGAGCCGGGT GGTCTTCCTG CTCTGGGGCG GGTATGCCCG GAGGAAGGCG
GCTCTGGTCA CGAATCCGCG TCACGTGGTG CTGGAGGCCG GCCACCCCAG CCCGATGAAC
CCGCGGGGGT TTCTGGGCAG CCGTCCGTTC AGCACCGCCA ACAAGGCGCT CGCCGACGCC
GGCAGGCCGA CGGTCGACTG GGAACGCACC GCCGGCTGA
 
Protein sequence
MHDAPTLDLL ALLPQEWRSA LAPHLDPART ASLADFVAEE YATRTVFPPV EDLFSAYRLC 
PPADCRVLIL GQDPYHRAGQ AHGLSFSVRD GVAMPPSLRN VFKELSADLG IPRPTSGNLC
GWAAQGVLLL NSVLTVREGS PGSHANRGWE EFTDATIRVL DALESRVVFL LWGGYARRKA
ALVTNPRHVV LEAGHPSPMN PRGFLGSRPF STANKALADA GRPTVDWERT AG