Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_4243 |
Symbol | |
ID | 5708093 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 4815807 |
End bp | 4816484 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 641273662 |
Product | peptidase M22 glycoprotease |
Protein accession | YP_001539015 |
Protein GI | 159039762 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1214] Inactive homolog of metal-dependent proteases, putative molecular chaperone |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.253504 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0145677 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTCGTAC TGGTGGTGGA CAGCTCGACG CCCGCGGTGG TCGCCGCTGT GGTGGAGGTC ACGGCAGCCG GCGTCGAGAC TCGGGCGCAC CGCTGCGCCG TCGACGCCCG GGCGCACGGT GAGCTGCTCG CCCCGCACGT CGACGCGGTC CTGGCCGACG TCGGCGTGCG CCCTTCCAGC CTCGATGCGA TCGTCGCCGG CCTCGGCCCA GGCCCGTTCA CCGGGCTGCG GGTGGGGCTG GCCACCGCCG CCACGATGGG GCAGGCGCTC GGCGTGCCCA CATACGGGGT CTGCTCGCTG GACGCCATCG GGTTCCCGGC TGCCGCCGGC GAGCCGGTCC TGGCGGCGAC GGATGCGCGG CGCCGGGAGA TCTACTGGGC GGTGTACGAC GGGGCCGGCC AGCGAATCGT GGGCCCCGAG GTGTCCGTTC CGGCGGTTGC CGCCACGCGC GCCCACGACC TTGCGGCCAC CGCCGCGGTC GGCGACGGCG CGCACCGGTA CGCGGCAACG TTGGGGTTGC CGGTCGCCGA TGAGCCCCGC TACCCGGCGG CGCTGGCGTT GGCCATGCTT GCCGCGGAGC GGGTCACCGC CGGTGCCCCC GGTGAGCCGC TCACCCCGCT CTACCTGCGC AGGCCGGACG CTGTCGCGGC GGCAGGCCAC AAGCCGGTCC TCCCGTGA
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Protein sequence | MLVLVVDSST PAVVAAVVEV TAAGVETRAH RCAVDARAHG ELLAPHVDAV LADVGVRPSS LDAIVAGLGP GPFTGLRVGL ATAATMGQAL GVPTYGVCSL DAIGFPAAAG EPVLAATDAR RREIYWAVYD GAGQRIVGPE VSVPAVAATR AHDLAATAAV GDGAHRYAAT LGLPVADEPR YPAALALAML AAERVTAGAP GEPLTPLYLR RPDAVAAAGH KPVLP
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