| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_4231 |
|---|
| Symbol | |
|---|
| ID | 5704402 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | - |
|---|
| Start bp | 4803939 |
|---|
| End bp | 4805576 |
|---|
| Gene Length | 1638 bp |
|---|
| Protein Length | 545 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641273650 |
|---|
| Product | chaperonin GroEL |
|---|
| Protein accession | YP_001539003 |
|---|
| Protein GI | 159039750 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
|---|
| TIGRFAM ID | [TIGR02348] chaperonin GroL |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.732523 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.119821 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGAAGA TCCTGAGCTT CTCGGACGAC GCTCGGCACC AGCTGGAGCA CGGTGTCAAC
GCCCTCGCGG ACGCGGTCAA GGTCACCCTC GGCCCCCGCG GGCGCAACGT CGTCCTAGAC
AAGAAGTTTG GTGCACCCAC GATCACCAAC GACGGCGTGA CGATCGCCAA GGAGATCGAG
CTCACCAACC CATACGAGAA TCTCGGCGCG CAGTTGGTCA AGGAGGTGGC GACCAAGACC
AACGACGTCG CCGGCGACGG GACCACCACC GCCACCGTGC TGGCCCAGGC GCTGGTCCGG
GAGGGCCTGC GCAACGTGGC GGCCGGCGCC AACCCGACCG GCCTCAAGCG GGGCATCGAC
GCGGCGGCGA CCAAGGTCTC CGAGGAACTG CTCGGCAAGG CCGTTGACGT GTCCGACAAG
GCGGCGATCG CCCACGTCGC GACCGTCTCC GCGCAGGACT CCACGATCGG CGAGCTCATC
GCCGAGGCGA TGGAGCGGGT CGGCCGCGAC GGTGTCATCA CCGTCGAGGA GGGCTCCACC
CTCGCCACCG AACTGGACGT GACCGAGGGT CTCCAGTTCG ACAAGGGCTT CATCTCCCCC
AACTTCGTCA CCGACGCGGA GGGGCAGGAG TCGGTCCTGG AGGACGCGTA CATCCTGATC
ACCACGCAGA AGATCTCGGC GATCGAGGAG CTGCTGCCGC TGCTGGAGAA GGTCCTCCAG
GAGAGCAAGC CGCTGCTCAT CATCGCCGAG GACGTCGAGG GGCAGGCGCT GTCCACCCTG
GTGGTCAACG CGCTCCGCAA GACCATGAAG GTCTGCGCGG TGAAGGCTCC CGGCTTCGGC
GACCGCCGCA AGGCGATGCT GCAGGACATG GCGATCCTGA CCGGTGCCGA GTTGGTCGCC
CCCGAGCTGG GCTACAAGCT CGACCAGGTT GGGCTCGAGG TGCTCGGCAC CGCCCGCCGC
GTGGTGGTCG ACAAGGAGAA CACCACCATC GTCGACGGCG GCGGCCAGGC ATCCGACGCC
GAGGACCGGG TCGCCCAGAT CCGCAAGGAG ATCGAGGCTT CGGACTCCGA GTGGGACCGG
GAGAAGCTCG CCGAGCGGCT GGCCAAGCTC TCCGGCGGCA TCGCCGTGAT CCGGGCGGGC
GCGGCGACCG AGGTCGAGAT GAAGGAGCGT AAGCACCGCA TCGAGGACGC CATCGCCGCC
ACCAAGGCCG CGGTCGAGGA GGGTACGGTG CCCGGCGGCG GTGCCGCCCT GGCCCAGGTC
CTGCCGGCGC TCGACGGCGA CCTCGGCCTC ACCGGGGACG AGCAGGTCGG TGTCTCGATC
GTGCGTAAGG CGCTGATCGA GCCGCTGCGC TGGATCGCGC AGAACGCCGG CCACGACGGC
TACGTGGTGG TGCAGAAGGT CGCCGGCAAG GACTGGGGCC ACGGTCTGGA CGCGGCCACG
GGCGAGTACG TCGACCTGGC CAAGGCCGGC ATCCTCGACC CGGTGAAGGT GACCCGCAAC
GCGGTCGCCA ACGCCGCGTC GATCGCGGGC CTGCTGCTCA CCACCGAGAG CCTCGTGGTG
GAGAAGCCGC AGGAGCCGGA GCCGGCCGCG GCTGGCCACG GCCACGGCCA CGGTCATCAG
CACGGCCCGG GCTTCTGA
|
|---|
| Protein sequence | MAKILSFSDD ARHQLEHGVN ALADAVKVTL GPRGRNVVLD KKFGAPTITN DGVTIAKEIE
LTNPYENLGA QLVKEVATKT NDVAGDGTTT ATVLAQALVR EGLRNVAAGA NPTGLKRGID
AAATKVSEEL LGKAVDVSDK AAIAHVATVS AQDSTIGELI AEAMERVGRD GVITVEEGST
LATELDVTEG LQFDKGFISP NFVTDAEGQE SVLEDAYILI TTQKISAIEE LLPLLEKVLQ
ESKPLLIIAE DVEGQALSTL VVNALRKTMK VCAVKAPGFG DRRKAMLQDM AILTGAELVA
PELGYKLDQV GLEVLGTARR VVVDKENTTI VDGGGQASDA EDRVAQIRKE IEASDSEWDR
EKLAERLAKL SGGIAVIRAG AATEVEMKER KHRIEDAIAA TKAAVEEGTV PGGGAALAQV
LPALDGDLGL TGDEQVGVSI VRKALIEPLR WIAQNAGHDG YVVVQKVAGK DWGHGLDAAT
GEYVDLAKAG ILDPVKVTRN AVANAASIAG LLLTTESLVV EKPQEPEPAA AGHGHGHGHQ
HGPGF
|
|---|
| |