| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_4226 |
|---|
| Symbol | |
|---|
| ID | 5704397 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | - |
|---|
| Start bp | 4797767 |
|---|
| End bp | 4798930 |
|---|
| Gene Length | 1164 bp |
|---|
| Protein Length | 387 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641273645 |
|---|
| Product | IMP dehydrogenase family protein |
|---|
| Protein accession | YP_001538998 |
|---|
| Protein GI | 159039745 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0516] IMP dehydrogenase/GMP reductase |
|---|
| TIGRFAM ID | [TIGR01304] IMP dehydrogenase family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.311533 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTGACG TGGTCGAGAT CGGGCTGGGC AAGACCGCGC AGCGCGGCTA CCACCTGGAC
GACATCGCGA TTGTGCCGAG CCGTCGCACC CGGGACGTGG ACGACGTGTC GACAGCCTGG
CAGCTCGACG CGTACCCGTT CGACATTCCC TGCGTCGGCC ACCCCTCCGA CGCGACGATG
AGCCCCGCCT CGGCGGTCCG GCTCAGCCAG CTCGGCGGCC TCGGCGTGCT CAACGTGGAG
GGTCTGTGGA CCCGCTACGA GAACCCGACG AAGGTACTGG AGGAACTGGC CAGCCTGGGC
GTGGACGCCT CGGGCCCGTC ACCACGTACC CCCCGCGCCG CCGCGGCCCG GCCCCGCCAC
ACCCGGCGGC TCCAGGAGGT GTACGCCGAG CCGATCCGCG CGGACCTGAT CGCCGAGCGG
GTCCGAGAGC TGCGGGCCGG CGGTGGGACG GTGGCGGTAC GTGTCTCACC GCAGCACACC
CTGGCGCTCG CCCCGGTGAT CCTCGACGCC GGGGTGGACA TCCTGGTGAT CCAGGGCACC
ATCGTCTCCG CCGAGCACGT CTCCACCACC GACGAGCCGC TGAACCTCAA GGAGTTCATC
GCCGACCTCG ACCTACCGGT GGTCGTCGGC GGCTGCACCG ACTACAAGAC CGCTCTGCAC
CTGATGCGTA CCGGTGCGGC CGGGGTGATC GTCGGTATCG GCGGCGACGA CTGGTCGACC
ACCGAATCGG TGCTGGGGAT CCGGGTGCCG ATGGCCACCG CGATCGCCGA CGCCGCCGCG
GCCCGTCGGG ACTACCTGGA CGAGACCGGC GGCCGGTACG TACACCTGAT CGCCGATGGC
GATATCCGGA CCTCCGGTGA CATTGCCAAG GCGCTCGGCT GCGGCGCCGA CGCGGTGATG
CTGGGCGAGC CGCTCTCGCT GTGCCCCGAG GCGCCGGCCG GTGGCGCCTG GTGGCACTCG
GCCGCCAGCC ATCCAGCTCT GCCCCGGGGC GCCTTCGAGG TCGCCGGAGA GCCGTTCGGC
TCGATGGAAC AGCTGCTGTA CGGACCGGCC GACGAGCCGG ACGGCCAGCT CAACCTCTTC
GGCGGGCTAC GCCGGGCGAT GGCCAAGTGC GGCTACCGTG ACCTCAAGGA GTTCCAGAAG
GTCGGCCTGG TCCTGGACCG CTGA
|
|---|
| Protein sequence | MRDVVEIGLG KTAQRGYHLD DIAIVPSRRT RDVDDVSTAW QLDAYPFDIP CVGHPSDATM
SPASAVRLSQ LGGLGVLNVE GLWTRYENPT KVLEELASLG VDASGPSPRT PRAAAARPRH
TRRLQEVYAE PIRADLIAER VRELRAGGGT VAVRVSPQHT LALAPVILDA GVDILVIQGT
IVSAEHVSTT DEPLNLKEFI ADLDLPVVVG GCTDYKTALH LMRTGAAGVI VGIGGDDWST
TESVLGIRVP MATAIADAAA ARRDYLDETG GRYVHLIADG DIRTSGDIAK ALGCGADAVM
LGEPLSLCPE APAGGAWWHS AASHPALPRG AFEVAGEPFG SMEQLLYGPA DEPDGQLNLF
GGLRRAMAKC GYRDLKEFQK VGLVLDR
|
|---|
| |