Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_4224 |
Symbol | |
ID | 5704395 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 4794564 |
End bp | 4796258 |
Gene Length | 1695 bp |
Protein Length | 564 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641273643 |
Product | FAD dependent oxidoreductase |
Protein accession | YP_001538996 |
Protein GI | 159039743 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.174352 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGTACG ACGTGGTCGT CATCGGGTCC GGATTCGGCG GTGGCGTCGC CGCGCTACGG CTCGCCGAGA AGGGCTACCG GGTCGGGGTG ATAGAGGCGG GCCGACGCTT CGCCGACGAC GAGTTCCCAC AGACCTCATG GCGGCTGCGC CGCTTCGTCT GGGCACCGCG GCTGGGTTGT TACGGCCTGC AGCGGATCAC GTTGCTGCGG GCGGGCAACC GGCGGGCCGG CGGCGGTGTG TTGGTGCTCT CCGGCGCCGG GGTGGGCGGA GGCTCACTGG TCTACGCAAA CACCTTGTAC GAGCCGTTGG ACGCCTTCTT CGGGGATCCG CAGTGGCGGG ACATCACCGA CTGGCGGGAC GAGTTGACCC GCCATTTCGA TCAGGCGAAG CGGATGCTCG GCGTCACCAC GTACCCGGTC ACGACCGGAG CGGATCGGGC GATGCGGGCG GTGGCGGACC GGATGGGGGT CGGGCACACG TACCGGGCCA CCCCGGTCGG GGTGCACATC GGTCGGCCCG GGCAGCGGGT GCCCGACCCG TACTTCGGTG GGGCGGGGCC GGAGCGCACC GGGTGTACGC ACTGCGGCGC CTGCATGACG GGGTGTCGGC ACGGCGCGAA GAACACGTTG GTCAAGAACT ACCTGTGGCT GGCCGAGCGG CTCGGGGCGC GGGTGCACCC GTTGACGACC GTGACCGCCG TCCGGCCGGT CGAGGGGGGC GGGTACGCGG TGCACACCGC ACGTACCGGC GCCTGGCTGC GTGGGCGTAC CCAGGTGATT CACGCTGACC AGGTGGTCTT CGCGGCCGGT GCGTTGGGTA CGCAGCGCCT GCTGCACGGG ATGAAGGCCA TCGGGGCGCT GCCCCGGCTC TCGCCCCGCC TCGGTGAGTT GACCCGAACC AACTCGGAGG CGATCGTCGG TGCGTCGGTG CCCCGGCGGC GGGCGCGAGC GGACGGGACC GACTTCACCG AGGGGGTGGC GATCACGAGT TCGTTCCACC CTGACTCCCA GACGCACATC GAGCCGGTCC GTTACGGCCG GGGCTCGAAT GCGATGGCGC TGCTCCAGTC CCTGCTGGTC GACGGTGGTC CTCGGCGGGT ACGCCGCTGG CTGGGCACCC ACGTGCGGCG GCCCCGCGAC GTGGTGCGGA TGCTGTCGGT CCGTAACTGG TCCGAGCGCA CCGTGATCGC CCTGGTCATG CAGTCGGTGG ACAATTCGCT GACCACTCGC CTCCGGCGAG GGCTCCGCGG CCGTCGGCTT GTCTCCGATG CCGGTCACGG AGCGCCGAAC CCGACCTGGA TCCCGGCCGG CAACCGGGCG GCTCGGCTCC TCGCCGAGGA GATCAACGGG GTGGCGGGCG GTTCGCTCAC CGAACCGTTC AACATCCCGG TGACCGCGCA CATCCTGGGT GGCGCGGTGA TCGGTGCCAC CCCGGACGAC GGCGTGGTCG ACCCGTGGCA CCGGGTGTAC GGGCACCCCG GGCTGCACGT CGTGGACGGT GCCGCGGTCT CGGCCAATCT CGGGGTGAAC CCGAGCCTGA CCATCACCGC CCAGGCCGAG CGGGCCATGT CCTTCTGGCC GAACAAGGGT GACGAGGATC ACCGCCCTCC GCTCGGCTCG TCGTACGTCC GGCTGGCCCC CGTACCTCCG GACAATCCGG CGGTGCCGGC CGACGCACCC GGCGCGCTGC GGTAG
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Protein sequence | MRYDVVVIGS GFGGGVAALR LAEKGYRVGV IEAGRRFADD EFPQTSWRLR RFVWAPRLGC YGLQRITLLR AGNRRAGGGV LVLSGAGVGG GSLVYANTLY EPLDAFFGDP QWRDITDWRD ELTRHFDQAK RMLGVTTYPV TTGADRAMRA VADRMGVGHT YRATPVGVHI GRPGQRVPDP YFGGAGPERT GCTHCGACMT GCRHGAKNTL VKNYLWLAER LGARVHPLTT VTAVRPVEGG GYAVHTARTG AWLRGRTQVI HADQVVFAAG ALGTQRLLHG MKAIGALPRL SPRLGELTRT NSEAIVGASV PRRRARADGT DFTEGVAITS SFHPDSQTHI EPVRYGRGSN AMALLQSLLV DGGPRRVRRW LGTHVRRPRD VVRMLSVRNW SERTVIALVM QSVDNSLTTR LRRGLRGRRL VSDAGHGAPN PTWIPAGNRA ARLLAEEING VAGGSLTEPF NIPVTAHILG GAVIGATPDD GVVDPWHRVY GHPGLHVVDG AAVSANLGVN PSLTITAQAE RAMSFWPNKG DEDHRPPLGS SYVRLAPVPP DNPAVPADAP GALR
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