Gene Sare_4222 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_4222 
Symbol 
ID5707960 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp4792575 
End bp4792886 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content69% 
IMG OID641273641 
Productphage shock protein C, PspC 
Protein accessionYP_001538994 
Protein GI159039741 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG1983] Putative stress-responsive transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.155341 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0141639 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATCG GCGGAACTCC CCAGCCCCCG TACAAACAGC TCCGTCGCCC CACCACCGAC 
CGGATGATCG CCGGGGTGGC CAGTGGCGTC GGCCGCTACC TCAACGTCGA CCCCACCCTG
ATCCGGGTGA TCTTCGCGGT CACCGGTCTG CTCACCGGCG GGATCGCACT ACTCGCATAC
CCGATCATGT GGTTCCTGAT GCCGGCGGAG CCGGCGAACG CACCGGCCTG GCCGCACCCG
ACCGGATCGA CCAGTGCTAC CCAAACCTGG CCAGGACCGG GGCCCCAGTC GCCGACTCCC
CCCGCCGGAT GA
 
Protein sequence
MTIGGTPQPP YKQLRRPTTD RMIAGVASGV GRYLNVDPTL IRVIFAVTGL LTGGIALLAY 
PIMWFLMPAE PANAPAWPHP TGSTSATQTW PGPGPQSPTP PAG