| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_4212 |
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| Symbol | |
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| ID | 5707950 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | - |
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| Start bp | 4780716 |
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| End bp | 4781726 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641273631 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001538984 |
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| Protein GI | 159039731 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0203123 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGGCGCT ACGTCATCCG ACGGTTGCTC CAGTTCATCC CGACCGTGCT GGGCACCATG
TTCCTGCTCC ACTACATGAC CTCGCTGGCG ATCCAGTTCA GCGGGAACCC GGTCCTGGCG
CTCTTCGGCG ACCGGACCCC GCCGCAGTCT GTGCTTGACG CGATCACCGA GCGGCTCGGT
TACTCCGACC CCTGCCTCGA CCAGAGGGGC AATCCCTGCC TCGGGCTCTT CGCCGATCGG
GTGAGCAATA TTTTCCTTCA CTTTGACTTC GGCATCAACC TCAATCGGGA AGAGGTCACC
GACATGGTGG CCAACGCCCT CCCGTTCACC CTGAAGCTGT TGGTGATCGC GATCGTCTTC
GAGGCGGTCG TCGGTATCGC GGCCGGGGTG TGGGCGGGTC TGCGGGGCGG CAGCTTCGCC
GACAACCTGG TGAAGATCAG CACCGTTTTC GTGATCTCTG TGCCGATCTT TGTGCTCGGC
GTCGTGGTGC GGGAGTTCGT CGGGGTCAAG TTCGGCAACA TTCTGCGTGA TCAGGAGTGG
ATTCCGGACG TTATCGCGAC GGGCGTCTTC AGTCCCGGCT TCAAGCCGGA CTACCCCTTG
GCCAGCCTGT TGATCCCGGG CATGGTTTTG GGCGCGGTCG CGCTCGCCAC CACCGCGCGC
CTGACCCGAA CCAGCATCAT GGAGAACATC CGGGCCGACT ACGTCCGGAC CGCTCGGGCC
AAGGGGCTGG CGAACAAGCG GGTCATTGGC GTGCACACGC TGCGTAACTC GTTGATCCCG
GTGATCACGT ACCTCGGTGT CGACATCGGC TCCGCCATGG CCGGCGCGGT GGTCACCGAG
ACCATCTTCA ACGTGCCTGG TATCGGACGG ATGGTGACGC ACGCCGCCCG TAGCGGTGAG
GCGGCCGTGG TCATCGGTGT GGTCACCATG CTGGTGCTGG TCGTTCTGGT CGCCAACCTG
CTGGTCGACC TCCTCTACGC CGTGCTCGAC CCAAGGATTC GCTATGAGTG A
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| Protein sequence | MGRYVIRRLL QFIPTVLGTM FLLHYMTSLA IQFSGNPVLA LFGDRTPPQS VLDAITERLG
YSDPCLDQRG NPCLGLFADR VSNIFLHFDF GINLNREEVT DMVANALPFT LKLLVIAIVF
EAVVGIAAGV WAGLRGGSFA DNLVKISTVF VISVPIFVLG VVVREFVGVK FGNILRDQEW
IPDVIATGVF SPGFKPDYPL ASLLIPGMVL GAVALATTAR LTRTSIMENI RADYVRTARA
KGLANKRVIG VHTLRNSLIP VITYLGVDIG SAMAGAVVTE TIFNVPGIGR MVTHAARSGE
AAVVIGVVTM LVLVVLVANL LVDLLYAVLD PRIRYE
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