| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_4209 |
|---|
| Symbol | |
|---|
| ID | 5704209 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | - |
|---|
| Start bp | 4777656 |
|---|
| End bp | 4778666 |
|---|
| Gene Length | 1011 bp |
|---|
| Protein Length | 336 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641273628 |
|---|
| Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
|---|
| Protein accession | YP_001538981 |
|---|
| Protein GI | 159039728 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4608] ABC-type oligopeptide transport system, ATPase component |
|---|
| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0022466 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGACA TCGTGCTGGA GGCCCGTGAC CTGGTGAAGC ACTTCCCGTT GACCCAGGGG
ATCCTCTTCA AGCGGCAGAT CGGTGCGGTC CGCGCGGTCG ATGGGATCAA TCTGCAGCTG
CGCCGGGGCG AGACGCTCGG CGTCGTCGGT GAGTCCGGTT GCGGCAAGTC GACCCTGGCC
CGGATGTTGG TGGGGCTGGA GACCCCCACC TCCGGTGACC TGTTCGTTCA GGGCCGGAAC
ATGGCGAAGG TGAGCGGTGC CGAACGACGT CGCGGCCGAC GCAACATCCA GTTGGTCATG
CAGGATCCGT ACACGTCGCT CAACCCGCGG ATGACCGTCG GTGACATCGT CGGTGAGCCG
TTCGTGGTGC ACCCCGAGGT GCTGCCAAAA CCGAGGCGGC GGGCTCGGGT CCAGGAGCTG
CTGGATCTGG TCGGGCTCAA CCCGGACCAC ATCAACCGGT ATCCGCACCA GTTCTCCGGC
GGCCAGCGCC AGCGCATCGG TATCGCCCGC GCGCTGGCGC TGAACCCGGA GATCATCCTG
TGTGACGAGC CGGTCTCCGC CCTGGACGTG TCGATCCAGG CTCAGGTGAT CAACCTGTTG
GAGAAGCTCC AGGACGAGCT GGGATTGTCG TACATCTTCA TCGCGCACGA CCTGTCCGTG
GTACGGCACA TTGCCGACCG GGTCGCAGTG ATGTACCTCG GTAAGATCGC CGAGATCGGC
ACCGAGGACC AGATCTACGA GAATCCGACC CACCCGTACA CCCAGGCGTT GCTCTCGGCG
GTGCCGGTGC CGGATCCCAA GCTGCGTGGC CTGCGGGACC AGATCGTCCT TACCGGTGAC
GTCCCGTCGC CGGCCAACCC GCCGTCCGGC TGCCGGTTCC GGACCCGCTG CTGGAAGGCC
CAGGACATCT GCGGTCAGCA GGAGCCGACG CTGGACGTCC GACAGGGCTC GGCGCACCCG
AGTGCCTGCC ACTTCGCCGA AGTCCGCGAC GTGGTGCACG CGCGGGAGTA G
|
|---|
| Protein sequence | MPDIVLEARD LVKHFPLTQG ILFKRQIGAV RAVDGINLQL RRGETLGVVG ESGCGKSTLA
RMLVGLETPT SGDLFVQGRN MAKVSGAERR RGRRNIQLVM QDPYTSLNPR MTVGDIVGEP
FVVHPEVLPK PRRRARVQEL LDLVGLNPDH INRYPHQFSG GQRQRIGIAR ALALNPEIIL
CDEPVSALDV SIQAQVINLL EKLQDELGLS YIFIAHDLSV VRHIADRVAV MYLGKIAEIG
TEDQIYENPT HPYTQALLSA VPVPDPKLRG LRDQIVLTGD VPSPANPPSG CRFRTRCWKA
QDICGQQEPT LDVRQGSAHP SACHFAEVRD VVHARE
|
|---|
| |