Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_4206 |
Symbol | |
ID | 5704206 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 4773620 |
End bp | 4774432 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641273625 |
Product | peptidase M23B |
Protein accession | YP_001538978 |
Protein GI | 159039725 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.00713418 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGCAGCACG GCATCCCCCG CTCGACCAGG AACATCGCGC CAGCCCGCCA CCGACGGCGG GCCAGCACCC GCCTCCGGGT GCTGCGGACC ACGGCCGTCG CCGTGGCCGG GGTCACCCTC GCCGGTGTCG TGGTAGCAGC AGTCACTGGA GGCAGCCACG ACACCGCACC AACGGGTGCC GTGGACATCG ACAGGCAGGC CGGGGCCGAA GCCTCCGCCC GAGCCGAGGC CGCCGCTCGA GCCGAGGCCG CCGCCCGGGC CGGTCGCTCC GTCCGAACGC CGGCGAGTAC CAGTCCGACC CCCAGCGCGT CGGTGAGCGC CACCGCACAG CCCTCGGCCA GCGCGGTACC GAAGGCGATG ACCAAACCGA CCGCGGCCGA GCCGACGCTG ACCAAGACCA CCGCGCCGGC ACCGGCCTGG GTCACCCCGA TGACCGATGC CGCCATCACC TCCTGTTATG GCCCTCGGTG GGGAGTCCTG CACGCTGGCA TCGACTTCGC GATGCCCGCC GGCACCCCGG TCCGCGCCGC CTACGACGGC ACCGTGACCA AGGCCAGCGA CGCCGGCGAC GGGTACGGCA TCTCGGTCGT GGTCGACCAC GGCAACGGGT ACCTGACCCA CTACGCCCAC CTGAGCACCG CGAAAGTAGG GCTCGGCGCC CAGGTCGCCG CCGGTGACAC CATCGGCCTG GAGGGCTCCA CCGGCGACTC CACCGGCCCG CACCTACACT TCGAGGTACA TCAGGGCCAG CTCTGGAACC AGATCGACCC GGCGCCGTTC CTCCGCGCCC GTGGCATCGA CCTGGCCTGC TGA
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Protein sequence | MQHGIPRSTR NIAPARHRRR ASTRLRVLRT TAVAVAGVTL AGVVVAAVTG GSHDTAPTGA VDIDRQAGAE ASARAEAAAR AEAAARAGRS VRTPASTSPT PSASVSATAQ PSASAVPKAM TKPTAAEPTL TKTTAPAPAW VTPMTDAAIT SCYGPRWGVL HAGIDFAMPA GTPVRAAYDG TVTKASDAGD GYGISVVVDH GNGYLTHYAH LSTAKVGLGA QVAAGDTIGL EGSTGDSTGP HLHFEVHQGQ LWNQIDPAPF LRARGIDLAC
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