Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_4205 |
Symbol | |
ID | 5704205 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 4772638 |
End bp | 4773348 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641273624 |
Product | peptidase M23B |
Protein accession | YP_001538977 |
Protein GI | 159039724 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0068065 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGCGCCAGC GCCTGTCGTC TGAGCCCGAT CGATATCGCG GCCGTCGCCG CGTACCCACC CCGCCGCGGA GCCGGTACGC CGCCGTTGTC ACCACCGCCT TCGTTGGTGC CGGCGGGGTC GCGCTTCTCG CCGGCGCCCT ACCGGATGCC AAGAGCGTCA GCCCGACGGT CCTCGACGAG CTGAAGGCCG CGTCCGCGTT GAGCGATGAC GCCGCGGAGC GCGCCAACGC CGCCGACCGC GCGTCGCGTG GCGGCGAACG CGACCACACC CAGGCGGAGT CAGAGGTCTG GCTGCTCCCG GTTCAGGGCT ACGAGTTCAA CTCCCCCTAC GGCGTCCGCT GGGGCGAGAT GCACAACGGC GTGGACCTGG TAGCCCCGGA GGGCACACCC TACGTCTCCA TCCATGACGG CACCGTCATC GAGGCCGGCT GGTTCGGTGG ATACGGATAC GCGGTGATCG TCCGTCACGC CGACGGCAGC GAGGCCATCT ACGGCCACTC CTCCGCGGTG AGCGTGCAGA AAGGCCAACA GGTCGAGGCC GGCGACCAGC TCGGGCTGGT CGGTAACACC GGCCACTCCT ACGGCTCCCA CCTGCACCTG GAAATCCATG TCAAGGGCGA ACCGCTCGAC CCGGTGCCCT GGCTGATGGA ACGCGGAGTG GACATCAAGC TCCAGGTGGA GACATTTTAC AGCGAGGTAA CCACCTCCTG A
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Protein sequence | MRQRLSSEPD RYRGRRRVPT PPRSRYAAVV TTAFVGAGGV ALLAGALPDA KSVSPTVLDE LKAASALSDD AAERANAADR ASRGGERDHT QAESEVWLLP VQGYEFNSPY GVRWGEMHNG VDLVAPEGTP YVSIHDGTVI EAGWFGGYGY AVIVRHADGS EAIYGHSSAV SVQKGQQVEA GDQLGLVGNT GHSYGSHLHL EIHVKGEPLD PVPWLMERGV DIKLQVETFY SEVTTS
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