| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_4198 |
|---|
| Symbol | purN |
|---|
| ID | 5704198 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | - |
|---|
| Start bp | 4766139 |
|---|
| End bp | 4766759 |
|---|
| Gene Length | 621 bp |
|---|
| Protein Length | 206 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641273617 |
|---|
| Product | phosphoribosylglycinamide formyltransferase |
|---|
| Protein accession | YP_001538970 |
|---|
| Protein GI | 159039717 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0299] Folate-dependent phosphoribosylglycinamide formyltransferase PurN |
|---|
| TIGRFAM ID | [TIGR00639] phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0718234 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.00625137 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGCCCGAGC CCGTGTCCGC CGCCCGTGTC GTCGTTCTCG TTTCCGGCTC CGGCAGCAAC
CTTCAGGCGC TGCTCGACGC CGGGACCGAC CCCGCGTACG GGGCTCGGGT GGTCGCGGTC
GGCGCGGACC GCGACGGCAT CGCCGGGCTG GACCGGGCTG TGGCGGCGGG GGTTCCGACG
TTCGTGGAGC GGGTCAAGGA CCACCCGACT CGCTCCGACT GGGACGCCGC GCTCACCGCG
CGGGTCGCCG AGCACGCGCC TGACCTGGTC GTCTCCGCCG GGTTCCTGAA ACTGGTCGGC
TCGCATTTCC TCGCCGCGTT CGGCGACCGC TACCTGAACA CACACAACAC CCTGCTGCCG
GCCTTCCCCG GCATCCACGG CCCCCGCGAC GCCCTCGCCT ACGGCGTGAA GATCACCGGG
GCCACGCTCT TCTTCGTTGA CGCGGGCACG GACACCGGCC CGATCGTTGC CCAGGTCGCG
GTGCCGGTGT GCGATGACGA CGACGAGGAG ACGCTCACCG AGCGCATCAA GGTGGCCGAG
CGGCATCAGC TCGTCGAGCA GGTGGGCCGC CTGGTCCGCG AAGGTTGGAC GATCACCGGA
AGAAAGGTCA CGGTTCCGTG A
|
|---|
| Protein sequence | MPEPVSAARV VVLVSGSGSN LQALLDAGTD PAYGARVVAV GADRDGIAGL DRAVAAGVPT
FVERVKDHPT RSDWDAALTA RVAEHAPDLV VSAGFLKLVG SHFLAAFGDR YLNTHNTLLP
AFPGIHGPRD ALAYGVKITG ATLFFVDAGT DTGPIVAQVA VPVCDDDDEE TLTERIKVAE
RHQLVEQVGR LVREGWTITG RKVTVP
|
|---|
| |