Gene Sare_4180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_4180 
Symbol 
ID5703968 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp4748147 
End bp4749187 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content69% 
IMG OID641273607 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_001538960 
Protein GI159039707 
COG category[R] General function prediction only 
COG ID[COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00217301 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCGCGC CCGCTAGCCC ATCGAAAAAG GTACGCGGCG AGCCGATCCT CGCCGTCGAG 
AACCTGGTCA AACACTTCCC GATCACCCGG GGCGTCGTCT TCCAACGGCA GATCGGCGCG
GTACGGGCCG TGGACGGGAT CAGTTTCGAC CTGCGCCGCG GCGAAACCCT CGGCATCGTC
GGCGAGTCCG GCTGCGGTAA GTCCACCCTG GCCCGGCTGC TGATGCGACT GGAGACGCCG
ACCTCCGGAC GAGCGACCCT GGAAGGCCGT GACCTGTTCG CCGCCCGCGG CACCGAACTG
CGCCGGCTGC GCCGCAACAT GCAGATGGTC CTCCAGGATC CGTACACCTC GCTGAACCCG
CGGATGACCG TCGGCGACAT CATCGGTGAA CCGTTCGAGA TTCACCCAGA GGCAGCGCCC
AAGGGCAGCC GGCAGCGGCG GGTCCAGGAA CTGCTGGACA TGGTCGGGCT CAACCCCGAG
CACATCAACC GGTACCCGCA CCAGTTCTCC GGCGGCCAGC GGCAGCGCAT CGGCATCGCC
CGCGCGCTCG CCCTGCGCCC CGAGGTGATC GTCTGCGACG AGCCGGTGTC CGCGCTGGAC
GTGTCGATCC AGGCGCAGGT GATCAACCTG CTGGAGCAGC TCCAGGACGA GCTCGGCCTC
TCGTACATCT TCATCGCCCA CGACCTGTCG GTGGTACGGC ACATCTGCGA CCGGGTCGCG
GTGATGTACC TGGGCCGAAT CGTGGAAATG GGCACCGAGG AGGAGATCTA CCAGCGGGCC
ACCCACCCGT ACACCCAGGC CCTGCTGTCC GCGGTGCCGG TGCCCGACCC GGAACAGCGG
AACAACCAGA ACATGATCCG GCTCGTCGGC GACGTACCGA GCCCGGCGAA CCCGCCGAGC
GGCTGCCGGT TCCGCACCCG GTGCTGGAAG GCACAGGACA TCTGTGCCAC CCAGGACCCG
GACGCCGTTC CCCGCGCCGC CGACCCGCAC CCGTCGGCCT GCCACTTCGC CGAACTCCGC
GAACCGGCGT CCCCCTCCTG A
 
Protein sequence
MTAPASPSKK VRGEPILAVE NLVKHFPITR GVVFQRQIGA VRAVDGISFD LRRGETLGIV 
GESGCGKSTL ARLLMRLETP TSGRATLEGR DLFAARGTEL RRLRRNMQMV LQDPYTSLNP
RMTVGDIIGE PFEIHPEAAP KGSRQRRVQE LLDMVGLNPE HINRYPHQFS GGQRQRIGIA
RALALRPEVI VCDEPVSALD VSIQAQVINL LEQLQDELGL SYIFIAHDLS VVRHICDRVA
VMYLGRIVEM GTEEEIYQRA THPYTQALLS AVPVPDPEQR NNQNMIRLVG DVPSPANPPS
GCRFRTRCWK AQDICATQDP DAVPRAADPH PSACHFAELR EPASPS