| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_4173 |
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| Symbol | |
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| ID | 5703961 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | - |
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| Start bp | 4739739 |
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| End bp | 4740953 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641273600 |
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| Product | isocitrate dehydrogenase |
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| Protein accession | YP_001538953 |
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| Protein GI | 159039700 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0538] Isocitrate dehydrogenases |
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| TIGRFAM ID | [TIGR00127] isocitrate dehydrogenase, NADP-dependent, eukaryotic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.374158 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00222704 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCGAAGA TCAAGGTAAG TAACCCGGTC GTGGAGCTCG ACGGCGACGA GATGACCCGG
ATCATCTGGA AGCAGATCCG GGAGCAGCTG ATCCTGCCCT ACCTCGACGT CGACCTGCGG
TACTACGACC TCTCGATCCA GCACCGTGAC GAGACCGACG ACCAGGCCAC CGTCGACGCC
GCCAACGCGA TCAAGGAGCA CGGTGTCGGC GTCAAGTGCG CCACGATCAC CCCGGACGAG
GCACGGGTCG AGGAGTTCGG CCTGAAGAAG ATGTGGCGGT CGCCGAACGG CACCATCCGT
AACATCCTCG GTGGCGTCGT CTTCCGCGAG CCCATCATCA TGTCCAACGT CCCGCGGCTG
GTGCCGGGCT GGACGAAGCC GATCATCATC GGCCGGCACG CCCACGGCGA CCAGTACAAG
GCCAGCGACT TCGTCGTCCC CGGGCCGGGC AAGGTCACCA TCACCTACAC CCCGGCCGAC
GGGGCGCAGC CGATCGAGAT GGAGATCGCC GACTTCCCCG GCGGCGGAGT CGCCATGGGC
ATGTACAACT TTGACGAGTC GATCCGGGAC TTCGCCCGTG CCTCCATGCG GTACGGCCTC
GACCGCGGCT ACCCGGTCTA CCTGTCGACC AAGAACACCA TCCTCAAGGC GTACGACGGT
CGGTTCAAGG ACATCTTCGC CGAGGTCTAC GAGAACGAGT TCAAGGCCGA CTTCGAGGCT
GCCGGCATCA GCTACGAGCA CCGACTGATC GACGACATGG TCGCTGCGGC GCTCAAGTGG
GAGGGCGGCT TCGTCTGGGC CTGCAAGAAC TACGACGGTG ACGTGCAGTC CGACACCGTC
GCGCAGGGCT TCGGCTCGCT CGGTCTGATG ACGTCCGTGC TGATGACCCC CGACGGCCGC
ACCGTCGAGG CCGAGGCCGC GCACGGCACC GTCACCCGGC ACTACCGGCA GTACCAGAAG
GGCGAGAAGA CCTCGACCAA CCCGATCGCC TCGATCTACG CCTGGACCCG GGGCCTGGCC
CACCGAGGCA AGCTGGACGG CACCCCGGCG GTTTCCGAGT TCGCCAACAC CCTGGAGAAG
GTCATCGTCG AGACCGTCGA GGGTGGCCAG ATGACCAAGG ACCTCGCGCT GCTCATCTCG
CGGGATGCCC CGTGGCTGAC CACCGACGAG TTCATGAACG CGCTGGACGA GAACCTGGCC
CGCAAGCTCG CCTGA
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| Protein sequence | MAKIKVSNPV VELDGDEMTR IIWKQIREQL ILPYLDVDLR YYDLSIQHRD ETDDQATVDA
ANAIKEHGVG VKCATITPDE ARVEEFGLKK MWRSPNGTIR NILGGVVFRE PIIMSNVPRL
VPGWTKPIII GRHAHGDQYK ASDFVVPGPG KVTITYTPAD GAQPIEMEIA DFPGGGVAMG
MYNFDESIRD FARASMRYGL DRGYPVYLST KNTILKAYDG RFKDIFAEVY ENEFKADFEA
AGISYEHRLI DDMVAAALKW EGGFVWACKN YDGDVQSDTV AQGFGSLGLM TSVLMTPDGR
TVEAEAAHGT VTRHYRQYQK GEKTSTNPIA SIYAWTRGLA HRGKLDGTPA VSEFANTLEK
VIVETVEGGQ MTKDLALLIS RDAPWLTTDE FMNALDENLA RKLA
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