Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_4157 |
Symbol | |
ID | 5708314 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 4722562 |
End bp | 4723131 |
Gene Length | 570 bp |
Protein Length | 189 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641273585 |
Product | deoxyribonuclease V |
Protein accession | YP_001538938 |
Protein GI | 159039685 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1515] Deoxyinosine 3'endonuclease (endonuclease V) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0737618 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.000116375 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | GTGGTGGGGC TTGACGTGTC GTACGAGAAA TCGACAAACC GGGTATGTGC AGCGGCCGTG GTGATCGAGC TGGAGTCGCT GGCGGTGACG GAAGTGGCGA CCGCTGTCGG GGAGGCTACT TTCCCATACG TCCCTGGTCT ACTCGCCTTT CGCGAAGCTC CGGTCTTGTT GGATGCGCTC CAAGGGTTGG CAACTGAGCC TGAGGTGTTG GTCTGTGACG GTTATGGAGT TGCGCATCCG AGACGTTTCG GCCTGGCCTG CCATGTTGGT GTGTTGACTG GTGTTCCATC CTTCGGAGTC GCCAAGACCT CCTTCATCGC CGACTTTGTG GATCCAGGAT TCAGGCGCGG TTCCTGGTCG CCGTTGACGG AGGGTGGAGA GGTTCTCGGC CATGCGTTGC GCACGCGGGA TGGGGTGAAG CCCGTGTTTG TTTCGGTTGG CCACCGGATT GGCCTGGATG AGGCGTGCGA GATAACCCTG AGGTTGTGCC CTCGTTATCG AGTCCCCGAG GCGACGCGTC AGGCGGACAT GGTGTCGAGG CGGATTCTGC ACTCCGCAAC TCGGTCCTGA
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Protein sequence | MVGLDVSYEK STNRVCAAAV VIELESLAVT EVATAVGEAT FPYVPGLLAF REAPVLLDAL QGLATEPEVL VCDGYGVAHP RRFGLACHVG VLTGVPSFGV AKTSFIADFV DPGFRRGSWS PLTEGGEVLG HALRTRDGVK PVFVSVGHRI GLDEACEITL RLCPRYRVPE ATRQADMVSR RILHSATRS
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