| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_4150 |
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| Symbol | sdhA |
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| ID | 5708307 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | + |
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| Start bp | 4716734 |
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| End bp | 4718647 |
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| Gene Length | 1914 bp |
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| Protein Length | 637 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641273578 |
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| Product | succinate dehydrogenase flavoprotein subunit |
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| Protein accession | YP_001538931 |
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| Protein GI | 159039678 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.052342 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.010572 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACTA CCACGCGAAT CGAACGACAC CACTACGACG TCGTCGTGAT CGGGGCCGGC
GGCGCTGGGC TGCGGGCGGC GATCGAGGCC CGGCTGGCCG GCAAGAAGAC CGCGATCATC
TCGAAGTCGC TCTTCGGCAA GGCACACACG GTGATGGCCG AAGGCGGCGC CGCCGCCGCG
ATGGGCAACG TGAACAGCCG GGACAGCTGG CAGGTGCACT TCCGCGACAC GATGCGCGGC
GGCAAGTTCC TGAACAACTT CCGCATGGCG GAACTGCACG CGAAGGAGTC GCCGCAGCGA
ATCTGGGAGC TGGAGACGTA CGGCGCCCTC TTCGACCGGA CGAAGGACGG GAGGATCTCG
CAGCGCAACT TCGGTGGACA CGAGTATCCG CGGCTGGCGC ACGTGGGCGA CCGGACCGGC
CTGGAGCTGA TCCGCACCCT CCAGCAGAAG ATCGTCTCCC TACAGCAGGA GGATCTGCGC
GAACACGGAT CGTACGACGC CCGGATCAGG GTCTTCGCCG AGACCACCAT CACCGAACTG
CTGCTCGACG GTGACCGGAT CGCCGGCGCC TTCGGCTACT ACCGCGAGTC GGGGGAGTTC
GTTCTCTTCG AAGCACCGGC GGTGGTGCTG GCGACCGGCG GGGTCGGCCG CTCGTACAAG
GTCACCTCGA ACTCCTGGGA GTACACCGGG GACGGGCACG CGCTGGCGCT ACGCGCCGGG
GCAACGCTGA TCAACATGGA GTTCCTCCAG TTCCATCCCA CCGGCATGGT CTGGCCACCT
TCGGTGAAGG GCATCCTGGT CACCGAATCG GTCCGCGGTG ACGGTGGTGT CCTGAAGAAC
TCCGAGGGCA AGCGGTTCAT GTTCGACTAT GTGCCGGATG TGTTCCGAAA GCAGTACGCG
GACAGCGAGG CCGAGGCGGA CCGCTGGTAC GACGACCCGG ACAACAACCG GCGTCCACCG
GAACTCCTTC CTCGCGACGA GGTGGCGCGG GCCATCAACA GCGAGGTCAA GGCCGGCCGG
GGCACTCCCG CCGGCGGCGT GTACCTGGAC ATCGCCTCCC GGCTGCCGGC CGAGGAAATT
CGCCGCCGCC TGCCGTCGAT GTACCACCAG TTCAAGGAAC TGGCCGACGT CGACATCACC
CAGGAGCCGA TGGAGGTCGG GCCGACCTGC CACTACGTCA TGGGTGGCGT GGAGGTCGAC
CCCGACTCCG GTGCGGCGTT CGGCCACGTC AACGGGTTGT TCGCCGCCGG AGAGGTGTCC
GGCGGCATGC ACGGTTCCAA CCGGCTCGGC GGCAACTCCC TGTCGGATCT GCTGGTCTTC
GGCAAGCGGG CCGGCGGGCA CGCCGCCTCG TACGCCGACG GGCTGGCGTC CCGGCCACGG
GTTCCGGTGC CGGCGGTGGA GGCCGCGGTG GAGACGGCCC TGGCCCCGTT GCAGCGGGAC
ACCGGCGAGA ACCCGTACGC CCTCCAGCAG GATCTCCAGG CGGTGATGGG TGACCTGGTC
GGCATCATCC GCCGAGAGGG CGAACTGGTC GACGCGCTGA GCCGACTCGG CGAGCTACGC
GAGCGGGTGG CCAAGGTGAG CGCGGCCGGC GGCCGGCGCT ACAACCCGGG CTGGCATCTT
GCTCTGGATC TACGCAACAT GCTGGTGGTG TCCGAGTGCA CCGCGAAGGC GGCGTTGGAG
CGACGGGAGT CGCGCGGCGG CCACACCCGG GAGGATCACC CGGCGATGGA TCCAGCGTGG
CGACGGGTCA ACCAGGTCTG TTCCCTGGAG GGCGACATCG TGCGTCTGGA CCGTAAGCCG
CTGCCGCGGA TGCGGCCGGA GCTCTTCGCG CTGTTTGACC GCGCGGAGTT GGCCAAGTAC
CTGACCGACG AGGAGCTGGC GGAGTTCGAC GTCCTCGCTG AGGAGGAGCG CTGA
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| Protein sequence | MTTTTRIERH HYDVVVIGAG GAGLRAAIEA RLAGKKTAII SKSLFGKAHT VMAEGGAAAA
MGNVNSRDSW QVHFRDTMRG GKFLNNFRMA ELHAKESPQR IWELETYGAL FDRTKDGRIS
QRNFGGHEYP RLAHVGDRTG LELIRTLQQK IVSLQQEDLR EHGSYDARIR VFAETTITEL
LLDGDRIAGA FGYYRESGEF VLFEAPAVVL ATGGVGRSYK VTSNSWEYTG DGHALALRAG
ATLINMEFLQ FHPTGMVWPP SVKGILVTES VRGDGGVLKN SEGKRFMFDY VPDVFRKQYA
DSEAEADRWY DDPDNNRRPP ELLPRDEVAR AINSEVKAGR GTPAGGVYLD IASRLPAEEI
RRRLPSMYHQ FKELADVDIT QEPMEVGPTC HYVMGGVEVD PDSGAAFGHV NGLFAAGEVS
GGMHGSNRLG GNSLSDLLVF GKRAGGHAAS YADGLASRPR VPVPAVEAAV ETALAPLQRD
TGENPYALQQ DLQAVMGDLV GIIRREGELV DALSRLGELR ERVAKVSAAG GRRYNPGWHL
ALDLRNMLVV SECTAKAALE RRESRGGHTR EDHPAMDPAW RRVNQVCSLE GDIVRLDRKP
LPRMRPELFA LFDRAELAKY LTDEELAEFD VLAEEER
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