| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_4134 |
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| Symbol | |
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| ID | 5705579 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | - |
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| Start bp | 4697722 |
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| End bp | 4698795 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641273562 |
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| Product | succinyl-diaminopimelate desuccinylase |
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| Protein accession | YP_001538915 |
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| Protein GI | 159039662 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01900] succinyl-diaminopimelate desuccinylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.100674 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0650172 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGAACC CGCTGACCCC CGAGGTCCTC GCTGATCCGG TGGCCCTGAC CCGCGCTCTG
GTCGACATCG AGTCCGTATC CCGCCACGAG AAGGCAATCG CGGACTGTGT CGAGCAGGTG
CTGCGCGGGG TGCCGCATCT GACCACCTAC CGGCACGGCA ACACCGTGAT GGCCCGGACC
GACCTCGGCC GGGCCCAGCG GGTGGTGCTC GCCGGGCACC TCGACACGGT TCCGATCAAC
AACAATTTCC CCGCCACGGT GCGCGGCGAC CTGATGTACG GCTGCGGCAC CTCGGACATG
AAAAGTGGTG TCGCGTACGC GTTACACCTC GCGGTGACCC TGCCCGAGCC GCGGTACGAC
GTGACGTACT TCTTCTATGA GGCGGAGGAG ATCGAGTCGA CGTACAACGG TCTGTTCCTC
GTCTCCGAGG CGTACCCGGA CTGGCTGTCG GCCGACTTCG CGCTGCTGTT GGAACCGACA
CACGGGATCG TCGAGGCGGG CTGCCAGGGC ACGTTGCGGG CCACCGTCGC CACCAGTGGC
GTACGGGCGC ACTCGGCGCG TTCCTGGTAC GGCGTCAACG CGATCCACGC CGCGGTGGAC
GTGTTGCGTC GGCTCGAGGC GTACGAGGCC CGTCGGACCA CTATCGAGGG TTGCGAATAC
CGAGAGGGTA TGAACGCGGT TCGGATCGAG GGTGGGGTCG CCGGCAACGT GGTGCCGGAC
CGCTGCGTGG TCGAGGTCAA CTTCCGGTTC GCGCCGGACC GTACCCCCGA GCAGGCCGAG
GCGCACGTGC GTGAGGTGTT CGCTGGCTTC GAGGTGACGA TCACCGACCT GGCGGCCGGT
GCGCTGCCGG GCCTGGAAGC TGCGCCAGCG CAGGAGTTCC TGGCGGCTGT CGGCACTGCG
CCCATCGGCA AGCTGGGCTG GACGGACGTG GCCCGGTTCG CCGCGTTGGG CACCCCGGCG
TTGAACTTCG GCCCGGGCGA CCCCAACCTT GCGCACCACC CGGATGAGCA CGTCGAAATC
GGCAAGATCC GCGACGGCGC GGCCGTTCTG CGTCGCTGGC TCTCGGTCGC CTGA
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| Protein sequence | MENPLTPEVL ADPVALTRAL VDIESVSRHE KAIADCVEQV LRGVPHLTTY RHGNTVMART
DLGRAQRVVL AGHLDTVPIN NNFPATVRGD LMYGCGTSDM KSGVAYALHL AVTLPEPRYD
VTYFFYEAEE IESTYNGLFL VSEAYPDWLS ADFALLLEPT HGIVEAGCQG TLRATVATSG
VRAHSARSWY GVNAIHAAVD VLRRLEAYEA RRTTIEGCEY REGMNAVRIE GGVAGNVVPD
RCVVEVNFRF APDRTPEQAE AHVREVFAGF EVTITDLAAG ALPGLEAAPA QEFLAAVGTA
PIGKLGWTDV ARFAALGTPA LNFGPGDPNL AHHPDEHVEI GKIRDGAAVL RRWLSVA
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