Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_4109 |
Symbol | |
ID | 5707659 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 4667325 |
End bp | 4667912 |
Gene Length | 588 bp |
Protein Length | 195 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641273536 |
Product | deaminase-reductase domain-containing protein |
Protein accession | YP_001538890 |
Protein GI | 159039637 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0262] Dihydrofolate reductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0444635 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCGTAAGC TTGTGTACTT CGTCGCCGTC ACACTCGACG GCTTCATCGC CGCGCCCGAC GGGTCGTTCG ACTTCTTTTC CCTGGAGCCC GATGTGGCGC CCTACCTGGT GGCCGAATGG CCCCAGACGC TACCCACGTT CACCCACGCC CAGCTCGGTG TCGCATCCCC CGCCGCCGGT CGTTTCGACA CCGTGCTGAT GGGCCGTGTC ACCTACGAGC CGGGCCTCAA GCTCGGATAC ACCAGCCCCT ACGACCACCT GAAGCAGTAC GTCTTCAGCC GGTCGCTCAC CTCTGCCGAA TACCCTGGTG TGGAGATCGT CTCCGGCGAT CCGACAGCAT TCGTCCGCAG GCTCAAGGCA CAGCCCGGGC GCGACATCTG GCTCTGCGGT GGCGGACAGC TCGCCGGCCA GCTCCTCGAC GACGTCGACG AACTTGTGCT CAAGCTCAAC CCGGTCGTCG TCGGCAGCGG CATCCCGCTG GTCGACCGGG GCTTCGACCC TCACCGTTTC GCGCTTACCT CAACGCGGCC CTTCGACAGT GGCGTGGTCG TCCTGCGCTA CACCCGGCAC GCCGGCGGGC CCGGCTGA
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Protein sequence | MRKLVYFVAV TLDGFIAAPD GSFDFFSLEP DVAPYLVAEW PQTLPTFTHA QLGVASPAAG RFDTVLMGRV TYEPGLKLGY TSPYDHLKQY VFSRSLTSAE YPGVEIVSGD PTAFVRRLKA QPGRDIWLCG GGQLAGQLLD DVDELVLKLN PVVVGSGIPL VDRGFDPHRF ALTSTRPFDS GVVVLRYTRH AGGPG
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