Gene Sare_4107 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_4107 
Symbol 
ID5706534 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp4665805 
End bp4666638 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content69% 
IMG OID641273533 
Productphosphoribosylaminoimidazole-succinocarboxamide synthase 
Protein accessionYP_001538888 
Protein GI159039635 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0152] Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase 
TIGRFAM ID[TIGR00081] phosphoribosylaminoimidazole-succinocarboxamide synthase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0411446 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAACTTC TGCACTCGGG CAAGGTCCGG GACGTCTACG CTGACGGCGG CGACCTGATC 
CTGGTCGCCT CCGACCGCAT CTCTGTCTAC GATGTGGTGC TGCCGACGCC GATTCCGGAC
AAGGGCAAGC TTCTCACGGC GCTCTCCCTG TGGTGGTTCG ACCAGCTCGC TGAGCTGGTG
CCGAACCATG TGCTCTCGGC GACCGACGTG CCGCCCGAGT TCGCTGGCCG GGCGATCCGG
TGCCGCCGCC TGGACATGGT TCCGGTGGAG TGCGTCGCCC GGGGCTATCT GACCGGTGGT
GGCTTCGCCG AGTACCAGCG CACCGGAGCG GTCTCCGGTG TCGAACTGCC GCGCGGGTTG
GTCGAGGCGG CCGCCCTGCC TGAGCCGGTC TTCACCCCCT CCACCAAGGC ACCGGTGGGC
GAGCACGACC AGCCGATCAC CTTCGGCGGG GTGGTGGACA GGGTCGGGGC GGAGACCGCC
GAGCGGCTGC GCCGAATCAC GCTCGACGTC TACCGGCGGG GAGCCGAACT GGCCGCCGGT
AGGGGGATCC TCATCGCCGA CACCAAGATC GAGCTGGGCT GGGCCGCCGA TGGCACGCTG
ACAGTCGGCG ACGAGCTGCT GACCTCGGAC TCGTCCCGGT TCTGGCCGGT CGAGTCCTAC
CAGCCGGGGC GCGCCCAGTT CTCGTACGAC AAACAGTACG TGCGGGACTG GGCCACCAGG
AGCGGGTGGG ACAAGCAGAG CCCGGCGCCG GAGCTGCCGG GTGAGGTCGT TGACGCTACC
CGCGCCCGCT ACGTCGACGT CTACGAGAAA CTCACCGGCA AGCGCTGGGG CTGA
 
Protein sequence
MELLHSGKVR DVYADGGDLI LVASDRISVY DVVLPTPIPD KGKLLTALSL WWFDQLAELV 
PNHVLSATDV PPEFAGRAIR CRRLDMVPVE CVARGYLTGG GFAEYQRTGA VSGVELPRGL
VEAAALPEPV FTPSTKAPVG EHDQPITFGG VVDRVGAETA ERLRRITLDV YRRGAELAAG
RGILIADTKI ELGWAADGTL TVGDELLTSD SSRFWPVESY QPGRAQFSYD KQYVRDWATR
SGWDKQSPAP ELPGEVVDAT RARYVDVYEK LTGKRWG